RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 RBM7Q9Y580 266 aaKnown RBP11.93□□□□□ -0.5
CCDC78-210ENST00000478979 ROS1P08922 2347 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 IGKV1-6A0A0C4DH72 117 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 SIRPB1O00241 398 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 TFF1P04155 84 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 GCH1P30793 250 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 FBXW9Q5XUX1 488 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 LHX4Q969G2 390 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 USF3Q68DE3 2245 aa11.93□□□□□ -0.5
CCDC78-210ENST00000478979 TNFSF13O75888 250 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 CEACAM21Q3KPI0 293 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 TMEM211Q6ICI0 200 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 C11orf42Q8N5U0 333 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 OR5T1Q8NG75 326 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 APOBEC3DQ96AK3 386 aaPredicted RBP11.92□□□□□ -0.5
CCDC78-210ENST00000478979 SLC22A20A6NK97 555 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 HMGB3O15347 200 aaKnown RBP11.92□□□□□ -0.5
CCDC78-210ENST00000478979 IL3RAP26951 378 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 HES3Q5TGS1 186 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 MDP1Q86V88 176 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 MRPL30Q8TCC3 161 aaKnown RBP11.92□□□□□ -0.5
CCDC78-210ENST00000478979 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 ZNF391Q9UJN7 358 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 RNF150Q9ULK6 438 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 ANKRD30BLA7E2S9 258 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 MT-CO3P00414 261 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 CEBPDP49716 269 aaPredicted RBP11.92□□□□□ -0.5
CCDC78-210ENST00000478979 ALKBH6Q3KRA9 238 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 SPSB4Q96A44 273 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
CCDC78-210ENST00000478979 A0A0G2JRQ6 117 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 LYZL6O75951 148 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 GYPAP02724 150 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 CHRNA7P36544 502 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 SRP14P37108 136 aaKnown RBP11.91□□□□□ -0.5
CCDC78-210ENST00000478979 FGF12P61328 243 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 ARG2P78540 354 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 ARL16Q0P5N6 197 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 TMEM41BQ5BJD5 291 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 FAM78BQ5VT40 261 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 POM121L2Q96KW2 1035 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 PSMG3Q9BT73 122 aaPredicted RBP11.91□□□□□ -0.5
CCDC78-210ENST00000478979 TMEM106BQ9NUM4 274 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 OR1A1Q9P1Q5 309 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
CCDC78-210ENST00000478979 ZFP30Q9Y2G7 519 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 CD59P13987 128 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 UCP1P25874 307 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 RAB7AP51149 207 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 RPL15P61313 204 aaKnown RBP11.91□□□□□ -0.5
CCDC78-210ENST00000478979 COLCA1Q6ZS62 124 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 RNASE8Q8TDE3 154 aaKnown RBP11.91□□□□□ -0.5
CCDC78-210ENST00000478979 TMEM45BQ96B21 275 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 MANBALQ9NQG1 85 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 IL36GQ9NZH8 169 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
CCDC78-210ENST00000478979 YPEL1O60688 119 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 GRPP07492 148 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 SP1P08047 785 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 TPTE2P1Q5T6R2 138 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 FAM53AQ6NSI3 398 aaPredicted RBP11.9□□□□□ -0.5
CCDC78-210ENST00000478979 KCNIP4Q6PIL6 250 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 TEX43Q6ZNM6 134 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 Q6ZWC4 215 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 ZNF525Q8N782 197 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 GATAD1Q8WUU5 269 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 IMMP2LQ96T52 175 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 FZR1Q9UM11 496 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 IGKV3D-15A0A087WSY6 115 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 A0A0U1RQK1 487 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 ZNF320A2RRD8 509 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 SP9P0CG40 484 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 OR4F5Q8NH21 305 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 CMTM2Q8TAZ6 248 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
CCDC78-210ENST00000478979 DUXBA0A1W2PPF3 345 aa11.9□□□□□ -0.51
CCDC78-210ENST00000478979 TMEM250H0YL14 139 aa11.9□□□□□ -0.51
CCDC78-210ENST00000478979 CDX4O14627 284 aaPredicted RBP11.9□□□□□ -0.51
CCDC78-210ENST00000478979 IAPPP10997 89 aa11.9□□□□□ -0.51
CCDC78-210ENST00000478979 CHRNB4P30926 498 aa11.9□□□□□ -0.51
CCDC78-210ENST00000478979 RBX1P62877 108 aa11.9□□□□□ -0.51
CCDC78-210ENST00000478979 TMEM183BQ1AE95 376 aa11.9□□□□□ -0.51
CCDC78-210ENST00000478979 GRIFINA4D1Z8 144 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 IGKV1D-33P01593 117 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 IGKV1-33P01594 117 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 PSMB3P49720 205 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 SERF2P84101 59 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 ACSF3Q4G176 576 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-210ENST00000478979 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 ZPBPQ9BS86 351 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 SPRY4Q9C004 299 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 INTS1Q8N201 2190 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms