RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 IGKV1D-8A0A087WSZ0 117 aa18.24■□□□□ 0.51
C9orf3-215ENST00000478473 I3L521 148 aa18.24■□□□□ 0.51
C9orf3-215ENST00000478473 OR8U9P0C7N5 309 aa18.24■□□□□ 0.51
C9orf3-215ENST00000478473 TALDO1P37837 337 aa18.24■□□□□ 0.51
C9orf3-215ENST00000478473 PITPNAQ00169 270 aa18.24■□□□□ 0.51
C9orf3-215ENST00000478473 C5orf30Q96GV9 206 aa18.24■□□□□ 0.51
C9orf3-215ENST00000478473 ELF5Q9UKW6 265 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-215ENST00000478473 M0R1X1 148 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 SOX15O60248 233 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 APOA2P02652 100 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 CD36P16671 472 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 RAB9AP51151 201 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 ZNF260Q3ZCT1 412 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 AKIRIN2Q53H80 203 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 MAFIPQ8WZ33 124 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 FLYWCH2Q96CP2 140 aaKnown RBP18.23■□□□□ 0.51
C9orf3-215ENST00000478473 DUX3Q96PT4 197 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 OR2D2Q9H210 308 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 METTL1Q9UBP6 276 aaKnown RBP18.23■□□□□ 0.51
C9orf3-215ENST00000478473 ETV7Q9Y603 341 aa18.23■□□□□ 0.51
C9orf3-215ENST00000478473 K7EIL1 84 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 CRYGBP07316 175 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 CTXN2P0C2S0 81 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 SNRPBP14678 240 aaKnown RBP18.22■□□□□ 0.51
C9orf3-215ENST00000478473 LGALS7P47929 136 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 LUMP51884 338 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-215ENST00000478473 TMEM267Q0VDI3 215 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-215ENST00000478473 DEFB136Q30KP8 78 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 TMEM65Q6PI78 240 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 LGALS14Q8TCE9 139 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 RHBDL2Q9NX52 303 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 FOXA2Q9Y261 457 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-215ENST00000478473 VSIG4Q9Y279 399 aa18.22■□□□□ 0.51
C9orf3-215ENST00000478473 IGLV2-23P01705 113 aa18.21■□□□□ 0.51
C9orf3-215ENST00000478473 NEDD8Q15843 81 aa18.21■□□□□ 0.51
C9orf3-215ENST00000478473 TMEM177Q53S58 311 aa18.21■□□□□ 0.51
C9orf3-215ENST00000478473 DDB2Q92466 427 aa18.21■□□□□ 0.51
C9orf3-215ENST00000478473 DPF1Q92782 380 aa18.21■□□□□ 0.51
C9orf3-215ENST00000478473 RNF167Q9H6Y7 350 aa18.21■□□□□ 0.51
C9orf3-215ENST00000478473 SLC35D1Q9NTN3 355 aa18.21■□□□□ 0.51
C9orf3-215ENST00000478473 ZMAT5Q9UDW3 170 aaKnown RBP18.21■□□□□ 0.51
C9orf3-215ENST00000478473 A0A0A6YYH2 397 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 A6NJ64 397 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 CLEC2LP0C7M8 214 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 RPS16P62249 146 aaKnown RBP18.2■□□□□ 0.5
C9orf3-215ENST00000478473 PLGLAQ15195 96 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 PYHIN1Q6K0P9 492 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 OR5M8Q8NGP6 311 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 SLC25A38Q96DW6 304 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 ADTRPQ96IZ2 230 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 GINS4Q9BRT9 223 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 GNB4Q9HAV0 340 aa18.2■□□□□ 0.5
C9orf3-215ENST00000478473 SSX5O60225 188 aa18.19■□□□□ 0.5
C9orf3-215ENST00000478473 RRASP10301 218 aa18.19■□□□□ 0.5
C9orf3-215ENST00000478473 HOXD3P31249 432 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-215ENST00000478473 SSBP2P81877 361 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-215ENST00000478473 ASPHD1Q5U4P2 390 aa18.19■□□□□ 0.5
C9orf3-215ENST00000478473 PPP1R27Q86WC6 154 aa18.19■□□□□ 0.5
C9orf3-215ENST00000478473 OR11H1Q8NG94 326 aa18.19■□□□□ 0.5
C9orf3-215ENST00000478473 LOC100506127A0A0U1RQW1 187 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 TMEM235A6NFC5 223 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 CA2P00918 260 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 HLA-DQB1P01920 261 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 DUTP33316 252 aaKnown RBP18.18■□□□□ 0.5
C9orf3-215ENST00000478473 MXD1Q05195 221 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 TIMM50Q3ZCQ8 353 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 CNIH2Q6PI25 160 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 OR5H6Q8NGV6 325 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 NUDCD2Q8WVJ2 157 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 TPSG1Q9NRR2 321 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 OR2W1Q9Y3N9 320 aa18.18■□□□□ 0.5
C9orf3-215ENST00000478473 A0A1W2PN81 502 aa18.17■□□□□ 0.5
C9orf3-215ENST00000478473 WI2-2373I1.2A0A1W2PRP0 233 aa18.17■□□□□ 0.5
C9orf3-215ENST00000478473 SLC25A17O43808 307 aa18.17■□□□□ 0.5
C9orf3-215ENST00000478473 CHRNA7P36544 502 aa18.17■□□□□ 0.5
C9orf3-215ENST00000478473 ECSCRQ19T08 205 aa18.17■□□□□ 0.5
C9orf3-215ENST00000478473 ST6GALNAC5Q9BVH7 336 aa18.17■□□□□ 0.5
C9orf3-215ENST00000478473 ANXA10Q9UJ72 324 aa18.17■□□□□ 0.5
C9orf3-215ENST00000478473 TRIM64CA6NLI5 447 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 ARPC1BO15143 372 aaKnown RBP18.16■□□□□ 0.5
C9orf3-215ENST00000478473 SLC22A5O76082 557 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 BRI3O95415 125 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 OR8U8P0C7N1 319 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 GNG2P59768 71 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 ZNF616Q08AN1 781 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 ACTBL2Q562R1 376 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 C9orf66Q5T8R8 295 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 CROCCP3Q8IVE0 287 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 LFNGQ8NES3 379 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 OR1N2Q8NGR9 330 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 ARPC1AQ92747 370 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 YIPF6Q96EC8 236 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 SPATA2Q9UM82 520 aa18.16■□□□□ 0.5
C9orf3-215ENST00000478473 A0A087WXM4 84 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 SRRM4A7MD48 611 aaKnown RBP18.15■□□□□ 0.5
C9orf3-215ENST00000478473 RAMP3O60896 148 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 TUSC2O75896 110 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 TNFAIP8O95379 198 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 GNB1P62873 340 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 FXYD3Q14802 87 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms