RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PUS1Q9Y606 427 aaKnown RBP eCLIP3.6□□□□□ -1.83
GPNMB-210ENST00000478451 WSB1Q9Y6I7 421 aa3.6□□□□□ -1.83
GPNMB-210ENST00000478451 ESPL1Q14674 2120 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ASXL3Q9C0F0 2248 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 REV3LO60673 3130 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 IGKV1-27A0A075B6S5 117 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 IGHV3-15A0A0B4J1V0 119 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 A0A0J9YW62 118 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 A0A1W2PRV1 198 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 IGSF23A1L1A6 192 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 NKX2-6A6NCS4 301 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 FAM24AA6NFZ4 105 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF716A6NP11 495 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ANKRD30BLA7E2S9 258 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CD300LBA8K4G0 201 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF724A8MTY0 619 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 TSTD3H0UI37 97 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CLDN34H7C241 214 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 PPP1R2P9O14990 202 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 TXNL1O43396 289 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CYTIPO60759 359 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 RAMP1O60894 148 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 MRPL33O75394 65 aaKnown RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SYNGR4O95473 234 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 NAPSAO96009 420 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CYB5R3P00387 301 aaPredicted RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 IFNA10P01566 189 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 MBP02144 154 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 OPN1MWP04001 364 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SRP19P09132 144 aaKnown RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 OPN1MW2P0DN77 364 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 OPN1MW3P0DN78 364 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CCL3P10147 92 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 COX6A1P12074 109 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 B4GALT1P15291 398 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 NQO2P16083 231 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 MC5RP33032 325 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 APLNRP35414 380 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 PPP1CCP36873 323 aaKnown RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 GLIPR1P48060 266 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 NOVA1P51513 510 aaKnown RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 DYNLT3P51808 116 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 OR2B8PP59922 312 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 RPS23P62266 143 aaKnown RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 HLA-DRB3P79483 266 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 PSG4Q00888 419 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 DEFA6Q01524 100 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 PRDX4Q13162 271 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ATP6V1FQ16864 119 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 RSPO1Q2MKA7 263 aaPredicted RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CEACAM16Q2WEN9 425 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CEACAM21Q3KPI0 293 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 NMSQ5H8A3 153 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 GUSBP11Q6P575 273 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SLC25A26Q70HW3 274 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SLC16A13Q7RTY0 426 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF573Q86YE8 665 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM252Q8N6L7 170 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ZIC4Q8N9L1 334 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 ZFP62Q8NB50 900 aaPredicted RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 OR5A2Q8NGI9 324 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 OR11L1Q8NGX0 322 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 PSMF1Q92530 271 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 LSM10Q969L4 123 aaKnown RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 CLDN23Q96B33 292 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 RAB39BQ96DA2 213 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 MUCL1Q96DR8 90 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 FER1L6-AS2Q96M78 137 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 IP6K3Q96PC2 410 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 TP53RKQ96S44 253 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 C20orf24Q9BUV8 137 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SCRT1Q9BWW7 348 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SPRY4Q9C004 299 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 PKIBQ9C010 78 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 PARP12Q9H0J9 701 aaKnown RBP3.59□□□□□ -1.83
GPNMB-210ENST00000478451 WNT5BQ9H1J7 359 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SH3BGRL3Q9H299 93 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 C11orf1Q9H5F2 150 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 WFDC1Q9HC57 220 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SH2D2AQ9NP31 389 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 GSN-AS1Q9NRJ2 163 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 SLC7A10Q9NS82 523 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 TREM2Q9NZC2 230 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 MIOXQ9UGB7 285 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 TIMM9Q9Y5J7 89 aa3.59□□□□□ -1.83
GPNMB-210ENST00000478451 BRWD1Q9NSI6 2320 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 IGKV3D-15A0A087WSY6 115 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 IGKV1-12A0A0C4DH73 117 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 SLC22A20A6NK97 555 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF729A6NN14 1252 aaPredicted RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 C9JQL5 133 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 HS3ST1O14792 307 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 WNT9BO14905 357 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CYB5BO43169 146 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 SPINT2O43291 252 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 SYNGR2O43760 224 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CHST1O43916 411 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CXCL13O43927 109 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 NDUFS7O75251 213 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms