RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 FOXA3P55318 350 aaPredicted RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 ACTBP60709 375 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 C1QTNF8P60827 252 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 DYNLL1P63167 89 aaKnown RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 ACTG1P63261 375 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 PRDX1Q06830 199 aaKnown RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 USF2Q15853 346 aaPredicted RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 TAL2Q16559 108 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 C6orf52Q5T4I8 152 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 FAM27BQ5VT28 67 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 FAM183BPQ6ZVS7 135 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 BZW1Q7L1Q6 419 aaKnown RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 SPATA12Q7Z6I5 190 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 SLC13A5Q86YT5 568 aaPredicted RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 SGMS2Q8NHU3 365 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 RPS4Y2Q8TD47 263 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 TNFAIP8L1Q8WVP5 186 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 RNASE6Q93091 150 aaKnown RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 SERPINI1Q99574 410 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 TTTY13Q9BZ97 58 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 ACOT13Q9NPJ3 140 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 RPRD1BQ9NQG5 326 aaKnown RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 OR5AC2Q9NZP5 309 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 JPT1Q9UK76 154 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 DOCK3Q8IZD9 2030 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 PKD1L1Q8TDX9 2849 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 KIAA1549Q9HCM3 1950 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 ABCC12Q96J65 1359 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 TRAV14DV4A0A0A6YYC5 116 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 IRGMA1A4Y4 181 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 I3L4J1 428 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 K7EN84 100 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 M0R378 163 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 CPLX1O14810 134 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 EPPINO95925 133 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 IGLV3-27P01718 113 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 PPBPP02775 128 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 SHBGP04278 402 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 TRGC1P0CF51 173 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 UBBP0CG47 229 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 ORM2P19652 201 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 IVDP26440 423 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 NKX2-5P52952 324 aaPredicted RBP-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 RAB38P57729 211 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 LINC00313P59037 77 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 PSMC5P62195 406 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 LRRC74AQ0VAA2 488 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 ZNF846Q147U1 533 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 PAFAH1B3Q15102 231 aaKnown RBP-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 TBC1D28Q2M2D7 210 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 ACSM3Q53FZ2 586 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 Q5BKY6 102 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 PLCXD3Q63HM9 321 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 LAMTOR1Q6IAA8 161 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 SLC35D2Q76EJ3 337 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 DOLPP1Q86YN1 238 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 MICU2Q8IYU8 434 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 ZNF675Q8TD23 568 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 DTD1Q8TEA8 209 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 BORCS5Q969J3 196 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 CCDC127Q96BQ5 260 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 CENPNQ96H22 339 aaPredicted RBP-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 TRNT1Q96Q11 434 aaKnown RBP-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 PLIN2Q99541 437 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 C11orf70Q9BRQ4 267 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 CHST6Q9GZX3 395 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 CLSTN2Q9H4D0 955 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 MRPL22Q9NWU5 206 aaKnown RBP-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 KLK9Q9UKQ9 250 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 KNTC1P50748 2209 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 NEURL4Q96JN8 1562 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 CASP8AP2Q9UKL3 1982 aa-0.79□□□□□ -2.54
NCKAP1-204ENST00000477988 CHD2O14647 1828 aaKnown RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 NF1P21359 2839 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 TRAV8-2A0A0B4J237 113 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 TRAV38-1A0A0B4J264 116 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 PSMD11O00231 422 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 MPHOSPH10O00566 681 aaKnown RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 CASC3O15234 703 aaKnown RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 HYPMO75409 117 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 PSMG1O95456 288 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 NUP62P37198 522 aaPredicted RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 RPL28P46779 137 aaKnown RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 TTPAP49638 278 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 TAS2R45P59539 299 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 HIST1H4AP62805 103 aaKnown RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 UBE2IP63279 158 aaKnown RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 RCN1Q15293 331 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 MIAQ16674 131 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 KRTAP19-8Q3LI54 63 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 SPRNQ5BIV9 151 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 ULK3Q6PHR2 472 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 AMTNQ6UX39 209 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 MRPL21Q7Z2W9 205 aaKnown RBP-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 DHFR2Q86XF0 187 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 C3orf56Q8N813 242 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 OR8B3Q8NGG8 313 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 OR11L1Q8NGX0 322 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 IMMP2LQ96T52 175 aa-0.8□□□□□ -2.54
NCKAP1-204ENST00000477988 YIPF3Q9GZM5 350 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms