RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
CLDN11-204ENST00000477531 GINS4Q9BRT9 223 aa12.22□□□□□ -0.45
CLDN11-204ENST00000477531 TOLLIPQ9H0E2 274 aa12.22□□□□□ -0.45
CLDN11-204ENST00000477531 SLC35D1Q9NTN3 355 aa12.22□□□□□ -0.45
CLDN11-204ENST00000477531 KCNK7Q9Y2U2 307 aa12.22□□□□□ -0.45
CLDN11-204ENST00000477531 NUBP2Q9Y5Y2 271 aa12.22□□□□□ -0.45
CLDN11-204ENST00000477531 DNAH9Q9NYC9 4486 aa12.22□□□□□ -0.45
CLDN11-204ENST00000477531 CA2P00918 260 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 OR8U9P0C7N5 309 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 GSTT2P0CG29 244 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 GSTT2BP0CG30 244 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 HIST1H1DP16402 221 aaKnown RBP12.21□□□□□ -0.45
CLDN11-204ENST00000477531 PSMB9P28065 219 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 GNB1P62873 340 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 TAGLNQ01995 201 aaKnown RBP12.21□□□□□ -0.45
CLDN11-204ENST00000477531 CABLES2Q9BTV7 478 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 ATG5Q9H1Y0 275 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 OR2D2Q9H210 308 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 GAB2Q9UQC2 676 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 FBXO7Q9Y3I1 522 aa12.21□□□□□ -0.45
CLDN11-204ENST00000477531 TRBV6-7A0A0A0MS04 114 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 LINC01619G3V211 115 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 RAB27BO00194 218 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 MFNGO00587 321 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 OVOL1O14753 267 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 SLC25A17O43808 307 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 PROP1O75360 226 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 CNIH1O95406 144 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 IGKV1-16P04430 117 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 LGALS7P47929 136 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 LINC00205P59089 165 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 RTL8BQ17RB0 113 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 C19orf54Q5BKX5 351 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 IGSF11Q5DX21 431 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 LFNGQ8NES3 379 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 FCGR1BQ92637 280 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 PRR25Q96S07 402 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
CLDN11-204ENST00000477531 SLA2Q9H6Q3 261 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 SCOCQ9UIL1 159 aa12.2□□□□□ -0.46
CLDN11-204ENST00000477531 SHISA3A0PJX4 238 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 SOX15O60248 233 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 LY86O95711 162 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 LGALS1P09382 135 aaKnown RBP12.19□□□□□ -0.46
CLDN11-204ENST00000477531 RRASP10301 218 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
CLDN11-204ENST00000477531 TPPP2P59282 170 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 FXYD3Q14802 87 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 SRSF7Q16629 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLDN11-204ENST00000477531 UBE2UQ5VVX9 321 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 SPARTQ8N0X7 666 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 CASTOR1Q8WTX7 329 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 MAFIPQ8WZ33 124 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 DCUN1D4Q92564 292 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 MS4A10Q96PG2 267 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
CLDN11-204ENST00000477531 ZNF355PQ9NSJ1 428 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 SDHAF2Q9NX18 166 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 ZNF230Q9UIE0 474 aaPredicted RBP12.19□□□□□ -0.46
CLDN11-204ENST00000477531 SSR3Q9UNL2 185 aa12.19□□□□□ -0.46
CLDN11-204ENST00000477531 A0A0B4J203 849 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 NOTOA8MTQ0 251 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 ARPC1BO15143 372 aaKnown RBP12.18□□□□□ -0.46
CLDN11-204ENST00000477531 SHOXO15266 292 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 SCGNO76038 276 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-204ENST00000477531 FGF9P31371 208 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-204ENST00000477531 ASPHD1Q5U4P2 390 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 C11orf87Q6NUJ2 197 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 TPRA1Q86W33 373 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 ADTRPQ96IZ2 230 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 HARBI1Q96MB7 349 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-204ENST00000477531 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLDN11-204ENST00000477531 STUB1Q9UNE7 303 aa12.18□□□□□ -0.46
CLDN11-204ENST00000477531 ZNF256Q9Y2P7 627 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-204ENST00000477531 SMIM30A4D0T7 59 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 SAP30O75446 220 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 IGHV3-11P01762 117 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 TRGV3P03979 118 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
CLDN11-204ENST00000477531 CTXN2P0C2S0 81 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 DTYMKP23919 212 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 CDNFQ49AH0 187 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 Q6ZS49 121 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 TMEM68Q96MH6 324 aa12.17□□□□□ -0.46
CLDN11-204ENST00000477531 TXNL4BQ9NX01 149 aaKnown RBP12.17□□□□□ -0.46
CLDN11-204ENST00000477531 C13orf42A0A1B0GVH6 325 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 H3BUA1 57 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 SLURP1P55000 103 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 PITPNAQ00169 270 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 POC5Q8NA72 575 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 BVESQ8NE79 360 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 DLX4Q92988 240 aaPredicted RBP12.16□□□□□ -0.46
CLDN11-204ENST00000477531 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
CLDN11-204ENST00000477531 TPSG1Q9NRR2 321 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms