RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PRH1P02810 166 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 DCKP27707 260 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 HLA-DRB3P79483 266 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 PJVKQ0ZLH3 352 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 RBM48Q5RL73 367 aaKnown RBP5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 LY6G6FQ5SQ64 297 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF343Q6P1L6 599 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 MOB1BQ7L9L4 216 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 PDPNQ86YL7 162 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF383Q8NA42 475 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 OR5AN1Q8NGI8 311 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 OR2K2Q8NGT1 345 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 APH1BQ8WW43 257 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 GGHQ92820 318 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 WDR89Q96FK6 387 aaPredicted RBP5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 USMG5Q96IX5 58 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 SLC29A1Q99808 456 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 RNF5Q99942 180 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 NICN1Q9BSH3 213 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 HDHD3Q9BSH5 251 aaPredicted RBP5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 C11orf54Q9H0W9 315 aaPredicted RBP5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 SIGLEC8Q9NYZ4 499 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 CLEC2DQ9UHP7 191 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 EXOSC1Q9Y3B2 195 aaKnown RBP5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 TRBV5-7A0A0A0MS05 114 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 A0A0J9YWU9 116 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 MSGN1A6NI15 193 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 PPP5D1E7EU14 171 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 BMPR1BO00238 502 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 MYL12BO14950 172 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 SCAF4O95104 1147 aaKnown RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 SCTP09683 121 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 UBBP0CG47 229 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 CELP19835 753 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 EDN2P20800 178 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 MAPK3P27361 379 aaPredicted RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 HTR2CP28335 458 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 RPS11P62280 158 aaKnown RBP eCLIP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 RPS27AP62979 156 aaKnown RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 MRPS15P82914 257 aaKnown RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 RHOGP84095 191 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 TAGLNQ01995 201 aaKnown RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 ATP5G2Q06055 141 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 IDO2Q6ZQW0 420 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 SLC16A13Q7RTY0 426 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 LAX1Q8IWV1 398 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 RPP25LQ8N5L8 163 aaKnown RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 OR52B4Q8NGK2 314 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 CACNG8Q8WXS5 425 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 TMEM80Q96HE8 168 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 PGLYRP3Q96LB9 341 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 TMEM68Q96MH6 324 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 DERL3Q96Q80 235 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 UQCC2Q9BRT2 126 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 C9orf16Q9BUW7 83 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 GGTLC1Q9BX51 225 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 OR2D2Q9H210 308 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 AKIP1Q9NQ31 210 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 MRPS18AQ9NVS2 196 aaKnown RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 GHRLQ9UBU3 117 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 AK3Q9UIJ7 227 aa5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 RBM7Q9Y580 266 aaKnown RBP5.04□□□□□ -1.6
RTFDC1-206ENST00000477485 LOC102724200A0A096LPH7 203 aaPredicted RBP5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF320A2RRD8 509 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF785A8K8V0 405 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 BET1O15155 118 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 DEDDO75618 318 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 ATP5HO75947 161 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 ACTL6BO94805 426 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 NAPSAO96009 420 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 IGHV3-23P01764 117 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 HLA-AP01891 365 aaKnown RBP5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 OR9G9P0C7N8 305 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 FOLR2P14207 255 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 TAS2R43P59537 309 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 RTL8BQ17RB0 113 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 DEFB114Q30KQ6 69 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 VMA21Q3ZAQ7 101 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 GLT8D1Q68CQ7 371 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 LINC00322Q6ZN03 302 aaPredicted RBP5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 CDH26Q8IXH8 852 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 KCNG3Q8TAE7 436 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 CYGBQ8WWM9 190 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 AGMATQ9BSE5 352 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 DCUN1D5Q9BTE7 237 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 RDH8Q9NYR8 311 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 DIMT1Q9UNQ2 313 aaKnown RBP5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 KLK5Q9Y337 293 aaPredicted RBP5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 S4R3C0 116 aa5.03□□□□□ -1.6
RTFDC1-206ENST00000477485 SACSQ9NZJ4 4579 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 DNAH1Q9P2D7 4330 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 HYDINQ4G0P3 5121 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 DPPA5A6NC42 116 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 C2orf70A6NJV1 201 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 FAM223BA6NKX1 122 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 ITGB1BP1O14713 200 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 SOCS1O15524 211 aa5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 RBMXL2O75526 392 aaKnown RBP5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 WBP4O75554 376 aaKnown RBP5.02□□□□□ -1.61
RTFDC1-206ENST00000477485 OR2J3O76001 311 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms