RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SMIM19Q96E16 107 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 C11orf54Q9H0W9 315 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-213ENST00000476777 MRPS18AQ9NVS2 196 aaKnown RBP8.5□□□□□ -1.05
BRCA1-213ENST00000476777 TECRQ9NZ01 308 aaKnown RBP8.5□□□□□ -1.05
BRCA1-213ENST00000476777 CKLFQ9UBR5 152 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 ZNF230Q9UIE0 474 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-213ENST00000476777 LOC102724200A0A096LPH7 203 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-213ENST00000476777 MSGN1A6NI15 193 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 OGG1O15527 345 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 NDUFB8O95169 186 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 NAPSAO96009 420 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 APELAP0DMC3 54 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 FOLR2P14207 255 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 ATF4P18848 351 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-213ENST00000476777 RPS11P62280 158 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCA1-213ENST00000476777 Q499Y3 187 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 OR2G6Q5TZ20 316 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 ZNF880Q6PDB4 577 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 CDH26Q8IXH8 852 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 RHOXF1Q8NHV9 184 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 FAAP24Q9BTP7 215 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 AKIP1Q9NQ31 210 aa8.49□□□□□ -1.05
BRCA1-213ENST00000476777 TRBV5-7A0A0A0MS05 114 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.48□□□□□ -1.05
BRCA1-213ENST00000476777 A0A1W2PPK0 400 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 EI24O14681 340 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 ATP8B1O43520 1251 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 APOA2P02652 100 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 CEACAM6P40199 344 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 ETV1P50549 477 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 RHOGP84095 191 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 EXOSC2Q13868 293 aaKnown RBP8.48□□□□□ -1.05
BRCA1-213ENST00000476777 MRGPRG-AS1Q2M3A8 158 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 C6orf201Q7Z4U5 140 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 TMEM61Q8N0U2 210 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 KCNG3Q8TAE7 436 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 EDARADDQ8WWZ3 215 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 PTX4Q96A99 478 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 Q96MT0 163 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 OR1A1Q9P1Q5 309 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 TP53TG1Q9Y2A0 90 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 RPL36Q9Y3U8 105 aaKnown RBP8.48□□□□□ -1.05
BRCA1-213ENST00000476777 ORC6Q9Y5N6 252 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 SELENOKQ9Y6D0 94 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 FAT2Q9NYQ8 4349 aa8.48□□□□□ -1.05
BRCA1-213ENST00000476777 TRBV9A0A0B4J1U6 114 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 FAM223BA6NKX1 122 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 LALBAP00709 142 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 PRH1P02810 166 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 OR9G9P0C7N8 305 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 ZBTB25P24278 435 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 BMI1P35226 326 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 ZNF45Q02386 682 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 ATP5G2Q06055 141 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 YIF1BQ5BJH7 314 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 MOB1BQ7L9L4 216 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 FAM223AQ8IWN6 122 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 PHB2Q99623 299 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 FGF20Q9NP95 211 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-213ENST00000476777 SLC35D1Q9NTN3 355 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 BABAM2Q9NXR7 383 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 DMRT1Q9Y5R6 373 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 DNAH2Q9P225 4427 aa8.47□□□□□ -1.05
BRCA1-213ENST00000476777 SRRM4A7MD48 611 aaKnown RBP8.46□□□□□ -1.06
BRCA1-213ENST00000476777 PPP5D1E7EU14 171 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 LGALS9O00182 355 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 SPRY2O43597 315 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 TUSC2O75896 110 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 HLA-AP01891 365 aaKnown RBP8.46□□□□□ -1.06
BRCA1-213ENST00000476777 CBLN1P23435 193 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 C1orf146Q5VVC0 180 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 ZNF57Q68EA5 555 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-213ENST00000476777 TMPRSS11AQ6ZMR5 421 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 Q6ZWC4 215 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 OR52B4Q8NGK2 314 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 SETD6Q8TBK2 473 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-213ENST00000476777 APH1BQ8WW43 257 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 CACNG8Q8WXS5 425 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 THRSPQ92748 146 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 PGLYRP3Q96LB9 341 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 HARBI1Q96MB7 349 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 UQCC2Q9BRT2 126 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 CHMP1AQ9HD42 196 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-213ENST00000476777 GHRLQ9UBU3 117 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 ZNF221Q9UK13 617 aa8.46□□□□□ -1.06
BRCA1-213ENST00000476777 DNAH17Q9UFH2 4485 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 TRBV6-6A0A0A6YYG2 114 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 M0R1X1 148 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 OR2C1O95371 312 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 DCKP27707 260 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 HTR2CP28335 458 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 RPS27AP62979 156 aaKnown RBP8.45□□□□□ -1.06
BRCA1-213ENST00000476777 DEFB135Q30KP9 77 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 TM4SF20Q53R12 229 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 OR10K2Q6IF99 312 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 ZFP41Q8N8Y5 198 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 SLC29A1Q99808 456 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms