RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 BLCAPP62952 87 aa23.56■■□□□ 1.36
HOXB3-208ENST00000476342 MSMO1Q15800 293 aa23.56■■□□□ 1.36
HOXB3-208ENST00000476342 TMEM229BQ8NBD8 167 aa23.56■■□□□ 1.36
HOXB3-208ENST00000476342 BORCS5Q969J3 196 aa23.56■■□□□ 1.36
HOXB3-208ENST00000476342 ZNF702PQ9H963 129 aa23.56■■□□□ 1.36
HOXB3-208ENST00000476342 TAS2R8Q9NYW2 309 aa23.56■■□□□ 1.36
HOXB3-208ENST00000476342 RBMX2Q9Y388 322 aaKnown RBP23.56■■□□□ 1.36
HOXB3-208ENST00000476342 V9GYH0 126 aa23.56■■□□□ 1.36
HOXB3-208ENST00000476342 CD3DP04234 171 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 IFNA6P05013 189 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 CSF1P09603 554 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 ABCA11PQ4W5N1 156 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 ARSJQ5FYB0 599 aaPredicted RBP23.55■■□□□ 1.36
HOXB3-208ENST00000476342 C11orf88Q6PI97 169 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 TMEM17Q86X19 198 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 PDPNQ86YL7 162 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 C5orf56Q8N8D9 126 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 MOB3AQ96BX8 217 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 SLC5A7Q9GZV3 580 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 SLC35D1Q9NTN3 355 aa23.55■■□□□ 1.36
HOXB3-208ENST00000476342 DUTP33316 252 aaKnown RBP23.54■■□□□ 1.36
HOXB3-208ENST00000476342 ETV6P41212 452 aa23.54■■□□□ 1.36
HOXB3-208ENST00000476342 CBX3Q13185 183 aa23.54■■□□□ 1.36
HOXB3-208ENST00000476342 MMDQ15546 238 aa23.54■■□□□ 1.36
HOXB3-208ENST00000476342 PYDC2Q56P42 97 aa23.54■■□□□ 1.36
HOXB3-208ENST00000476342 Q8N2B8 174 aa23.54■■□□□ 1.36
HOXB3-208ENST00000476342 ZBTB34Q8NCN2 500 aa23.54■■□□□ 1.36
HOXB3-208ENST00000476342 RNF114Q9Y508 228 aa23.54■■□□□ 1.36
HOXB3-208ENST00000476342 M0QYG6 137 aa23.53■■□□□ 1.36
HOXB3-208ENST00000476342 IGLV2-14P01704 120 aa23.53■■□□□ 1.36
HOXB3-208ENST00000476342 AMY1AP04745 511 aa23.53■■□□□ 1.36
HOXB3-208ENST00000476342 AMY2AP04746 511 aa23.53■■□□□ 1.36
HOXB3-208ENST00000476342 LINC00205P59089 165 aa23.53■■□□□ 1.36
HOXB3-208ENST00000476342 SPATA3Q8NHX4 192 aa23.53■■□□□ 1.36
HOXB3-208ENST00000476342 CCL28Q9NRJ3 127 aa23.53■■□□□ 1.36
HOXB3-208ENST00000476342 CD74P04233 296 aa23.52■■□□□ 1.36
HOXB3-208ENST00000476342 RTL8BQ17RB0 113 aa23.52■■□□□ 1.36
HOXB3-208ENST00000476342 RBMXL1Q96E39 390 aaKnown RBP23.52■■□□□ 1.36
HOXB3-208ENST00000476342 HSD17B10Q99714 261 aaKnown RBP23.52■■□□□ 1.36
HOXB3-208ENST00000476342 RNF5Q99942 180 aa23.52■■□□□ 1.36
HOXB3-208ENST00000476342 PLSCR3Q9NRY6 295 aa23.52■■□□□ 1.36
HOXB3-208ENST00000476342 RRASP10301 218 aa23.51■■□□□ 1.35
HOXB3-208ENST00000476342 F2RL1P55085 397 aa23.51■■□□□ 1.35
HOXB3-208ENST00000476342 STEAP1BQ6NZ63 245 aa23.51■■□□□ 1.35
HOXB3-208ENST00000476342 KCTD9Q7L273 389 aa23.51■■□□□ 1.35
HOXB3-208ENST00000476342 ARRDC1Q8N5I2 433 aa23.51■■□□□ 1.35
HOXB3-208ENST00000476342 Q8N9W7 124 aa23.51■■□□□ 1.35
HOXB3-208ENST00000476342 TINAGL1Q9GZM7 467 aaPredicted RBP23.51■■□□□ 1.35
HOXB3-208ENST00000476342 LIN7CQ9NUP9 197 aaKnown RBP23.51■■□□□ 1.35
HOXB3-208ENST00000476342 KIAA1456Q9P272 454 aa23.51■■□□□ 1.35
HOXB3-208ENST00000476342 RAB3DO95716 219 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 ZNF79Q15937 498 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 C9orf152Q5JTZ5 239 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 Q8N402 240 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 FLYWCH2Q96CP2 140 aaKnown RBP23.5■■□□□ 1.35
HOXB3-208ENST00000476342 RASL11BQ9BPW5 248 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 PRELID3BQ9Y3B1 194 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 STAB1Q9NY15 2570 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 LINC00473A8K010 186 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 NBR2O15453 112 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 IGKV1-16P04430 117 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 MEF2DQ14814 521 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 CNPY1Q3B7I2 92 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 ZNF66Q6ZN08 573 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 FAM71E2Q8N5Q1 922 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 C3orf56Q8N813 242 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 DDB2Q92466 427 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 THAP7Q9BT49 309 aaPredicted RBP23.5■■□□□ 1.35
HOXB3-208ENST00000476342 FXYD6Q9H0Q3 95 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 SIGLEC9Q9Y336 463 aa23.5■■□□□ 1.35
HOXB3-208ENST00000476342 LPCAT3Q6P1A2 487 aa23.49■■□□□ 1.35
HOXB3-208ENST00000476342 ZNF818PQ6ZRF7 136 aa23.49■■□□□ 1.35
HOXB3-208ENST00000476342 Q6ZS46 218 aa23.49■■□□□ 1.35
HOXB3-208ENST00000476342 BVESQ8NE79 360 aa23.49■■□□□ 1.35
HOXB3-208ENST00000476342 NPBQ8NG41 125 aa23.49■■□□□ 1.35
HOXB3-208ENST00000476342 RITA1Q96K30 269 aa23.49■■□□□ 1.35
HOXB3-208ENST00000476342 SH2D7A6NKC9 451 aaPredicted RBP23.48■■□□□ 1.35
HOXB3-208ENST00000476342 AKAIN1P0CW23 69 aa23.48■■□□□ 1.35
HOXB3-208ENST00000476342 VDAC2P45880 294 aaPredicted RBP23.48■■□□□ 1.35
HOXB3-208ENST00000476342 PROK1P58294 105 aa23.48■■□□□ 1.35
HOXB3-208ENST00000476342 RPS16P62249 146 aaKnown RBP23.48■■□□□ 1.35
HOXB3-208ENST00000476342 TSNAXQ99598 290 aaKnown RBP23.48■■□□□ 1.35
HOXB3-208ENST00000476342 ANKRD20A5PA0PJZ0 165 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 PEX14O75381 377 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 NDUFA3O95167 84 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 CNTFRP26992 372 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 GNRHRP30968 328 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 CATR1Q13166 79 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 EIF4EBP1Q13541 118 aaPredicted RBP23.47■■□□□ 1.35
HOXB3-208ENST00000476342 MFSD4AQ8N468 514 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 OR4D10Q8NGI6 311 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 TCTEX1D2Q8WW35 142 aa23.47■■□□□ 1.35
HOXB3-208ENST00000476342 TENM1Q9UKZ4 2725 aa23.46■■□□□ 1.35
HOXB3-208ENST00000476342 HAX1O00165 279 aa23.46■■□□□ 1.35
HOXB3-208ENST00000476342 TNFSF12O43508 249 aa23.46■■□□□ 1.35
HOXB3-208ENST00000476342 CMTM1Q8IZ96 169 aa23.46■■□□□ 1.35
HOXB3-208ENST00000476342 SERTAD4Q9NUC0 356 aa23.46■■□□□ 1.35
HOXB3-208ENST00000476342 SPDEFO95238 335 aa23.45■■□□□ 1.34
HOXB3-208ENST00000476342 UCP3P55916 312 aa23.45■■□□□ 1.34
HOXB3-208ENST00000476342 RPL30P62888 115 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms