RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-218	ENST00000475657	SMIM4	Q8WVI0	70 aa		10.82	□□□□□ -0.68
FAM3A-218	ENST00000475657	TSC22D3	Q99576	134 aa		10.82	□□□□□ -0.68
FAM3A-218	ENST00000475657	CMSS1	Q9BQ75	279 aa	Known RBP	10.82	□□□□□ -0.68
FAM3A-218	ENST00000475657	CALY	Q9NYX4	217 aa		10.82	□□□□□ -0.68
FAM3A-218	ENST00000475657	OR6C3	Q9NZP0	311 aa		10.82	□□□□□ -0.68
FAM3A-218	ENST00000475657	PSG11	Q9UQ72	335 aa		10.82	□□□□□ -0.68
FAM3A-218	ENST00000475657	TRBV6-6	A0A0A6YYG2	114 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657		A0A1W2PPI3	338 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	GABARAP	H6UMI1	98 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657		J3QR06	171 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	IFNA6	P05013	189 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	IGHV4-30-4	P0DP06	118 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	PSMB8	P28062	276 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	ZNF616	Q08AN1	781 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	MADCAM1	Q13477	382 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	EBI3	Q14213	229 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	ASPHD1	Q5U4P2	390 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	MOB1B	Q7L9L4	216 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	TGIF2LX	Q8IUE1	241 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	OR8H3	Q8N146	312 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	GDPD1	Q8N9F7	314 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	GPX8	Q8TED1	209 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	NUDCD2	Q8WVJ2	157 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	DDB2	Q92466	427 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	SRR	Q9GZT4	340 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	LIN7C	Q9NUP9	197 aa	Known RBP	10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	IDI2-AS1	Q9NZ38	188 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	ZNF580	Q9UK33	172 aa		10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	ELF5	Q9UKW6	265 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM3A-218	ENST00000475657	KIAA1109	Q2LD37	5005 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	IGHV3-72	A0A0B4J1Y9	119 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657		I3L521	148 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	OVOL1	O14753	267 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	GSTZ1	O43708	216 aa	Predicted RBP	10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	SSX5	O60225	188 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	MT-ND4	P03905	459 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	FCGR3A	P08637	254 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	PTHLH	P12272	177 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	CD40LG	P29965	261 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	SSTR5	P35346	364 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	REG1B	P48304	166 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	SSBP1	Q04837	148 aa	Known RBP	10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	PYDC2	Q56P42	97 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	ZNF554	Q86TJ5	538 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657		Q8N1Y9	231 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	ZNF565	Q8N9K5	539 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	MRPL30	Q8TCC3	161 aa	Known RBP	10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	FCAMR	Q8WWV6	532 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	CYYR1	Q96J86	154 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	UBE2E2	Q96LR5	201 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	ANAPC10	Q9UM13	185 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	MGAT4A	Q9UM21	535 aa		10.8	□□□□□ -0.68
FAM3A-218	ENST00000475657	SAP30	O75446	220 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	IGKV1D-33	P01593	117 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	IGKV1-33	P01594	117 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	RAB7A	P51149	207 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	PPP5C	P53041	499 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	ACTB	P60709	375 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	C6orf183	Q5T699	404 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	ZNF880	Q6PDB4	577 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	TRAT1	Q6PIZ9	186 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657		Q8N402	240 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	OR52I2	Q8NH67	350 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	CCDC107	Q8WV48	283 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	LINC00476	Q8WZB0	136 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	DCUN1D4	Q92564	292 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	ST6GALNAC6	Q969X2	333 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	CCDC32	Q9BV29	185 aa		10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	MBNL3	Q9NUK0	354 aa	Known RBP	10.79	□□□□□ -0.68
FAM3A-218	ENST00000475657	TNC	P24821	2201 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	RCVRN	P35243	200 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	KIAA0141	Q14154	515 aa	Predicted RBP	10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657		Q6ZS49	121 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	MOB3B	Q86TA1	216 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	OR10X1	Q8NGY0	326 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	GHITM	Q9H3K2	345 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657		Q9N2K0	584 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	IFT46	Q9NQC8	304 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	MTFP1	Q9UDX5	166 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	ZNF107	Q9UII5	783 aa	Predicted RBP	10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	TRAPPC2L	Q9UL33	140 aa		10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	RBMX2	Q9Y388	322 aa	Known RBP	10.78	□□□□□ -0.68
FAM3A-218	ENST00000475657	IGHV3-43	A0A0B4J1X8	118 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	NPIPB11	E5RHQ5	1161 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	SLC25A17	O43808	307 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	RBBP9	O75884	186 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	IGF1	P05019	195 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	OR5H8	P0DN80	308 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	IGHV3-43D	P0DP04	118 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	VDAC1	P21796	283 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	HOGA1	Q86XE5	327 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	SGPP2	Q8IWX5	399 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657		Q8N6K4	173 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657		Q8N9W7	124 aa		10.77	□□□□□ -0.69
FAM3A-218	ENST00000475657	OR4K15	Q8NH41	348 aa		10.77	□□□□□ -0.69

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