RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 LYL1P12980 280 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 CXCL2P19875 107 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 EPHA1P21709 976 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 IL3RAP26951 378 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 COL8A1P27658 744 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 BRWD1-AS2P59051 145 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 TENM4Q6N022 2769 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 KIR3DL3Q8N743 410 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 OR4D5Q8NGN0 318 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 OR4S2Q8NH73 311 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 C10orf105Q8TEF2 133 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 DDB2Q92466 427 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 DCUN1D4Q92564 292 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 PERPQ96FX8 193 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 CLEC7AQ9BXN2 247 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 GSX2Q9BZM3 304 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 ZNRD1Q9P1U0 126 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 TNFSF18Q9UNG2 199 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 LSM5Q9Y4Y9 91 aaKnown RBP11.22□□□□□ -0.61
TRAF4-210ENST00000475329 MMP24Q9Y5R2 645 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 IGHV2-26A0A0B4J1V2 119 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 A0A0G2JRQ6 117 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 H0YIZ8 118 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 K7EPK0 472 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 MBPP02686 304 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-210ENST00000475329 RLN2P04090 185 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF137PP52743 207 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 PRRX1P54821 245 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 DSCR9P59020 149 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 LINC00205P59089 165 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 LMO4P61968 165 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-210ENST00000475329 FAM219AQ8IW50 185 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 FOXRED2Q8IWF2 684 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 FAM71E2Q8N5Q1 922 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 OR1S1Q8NH92 325 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 NRGNQ92686 78 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 TMEM186Q96B77 213 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 MFFQ9GZY8 342 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 PLEKHA2Q9HB19 425 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 POMT1Q9Y6A1 747 aa11.21□□□□□ -0.61
TRAF4-210ENST00000475329 LRRK2Q5S007 2527 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 VWC2LB2RUY7 222 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 FOXH1O75593 365 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 DEDDO75618 318 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 OR2F2O95006 317 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 HPRT1P00492 218 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 G6PCP35575 357 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 NUP62P37198 522 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-210ENST00000475329 NKX2-1P43699 371 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-210ENST00000475329 OR2F1Q13607 317 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 ZNF345Q14585 488 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 TMUB2Q71RG4 321 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 ZNF383Q8NA42 475 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 INO80EQ8NBZ0 244 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-210ENST00000475329 BEND2Q8NDZ0 799 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 OR13D1Q8NGV5 346 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 R3HDM4Q96D70 268 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
TRAF4-210ENST00000475329 AMMECR1Q9Y4X0 333 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-210ENST00000475329 COL12A1Q99715 3063 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 IGHV2-70DA0A0C4DH43 119 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 A0A0D9SG52 128 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 TSC22D2O75157 780 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 KRASP01116 189 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 APOA2P02652 100 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 COX7A1P24310 79 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 ZFP36P26651 326 aaKnown RBP11.19□□□□□ -0.62
TRAF4-210ENST00000475329 S100A11P31949 105 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 ERVK-16P61578 105 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 ARF6P62330 175 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 LCN2P80188 198 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 TAGLNQ01995 201 aaKnown RBP11.19□□□□□ -0.62
TRAF4-210ENST00000475329 RTL8BQ17RB0 113 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 HLA-DRB5Q30154 266 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 DHRS7BQ6IAN0 325 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-210ENST00000475329 C1orf122Q6ZSJ8 110 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 ACOT7LQ6ZUV0 252 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 Q8N7P7 452 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 GON7Q9BXV9 100 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 MRPL20Q9BYC9 149 aaKnown RBP11.19□□□□□ -0.62
TRAF4-210ENST00000475329 SLA2Q9H6Q3 261 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 RCL1Q9Y2P8 373 aaKnown RBP11.19□□□□□ -0.62
TRAF4-210ENST00000475329 KPTNQ9Y664 436 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 SETXQ7Z333 2677 aaKnown RBP11.19□□□□□ -0.62
TRAF4-210ENST00000475329 ARID1AO14497 2285 aa11.19□□□□□ -0.62
TRAF4-210ENST00000475329 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
TRAF4-210ENST00000475329 E5RGE8 158 aa11.18□□□□□ -0.62
TRAF4-210ENST00000475329 WRBO00258 174 aa11.18□□□□□ -0.62
TRAF4-210ENST00000475329 PITX3O75364 302 aa11.18□□□□□ -0.62
TRAF4-210ENST00000475329 CRYZL1O95825 349 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms