RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 RPS16P62249 146 aaKnown RBP7.36□□□□□ -1.23
PDPN-204ENST00000475043 ZNF773Q6PK81 442 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 TPRA1Q86W33 373 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 RNF152Q8N8N0 203 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 OR5AN1Q8NGI8 311 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 OR5M8Q8NGP6 311 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 C4orf3Q8WVX3 66 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 OR5B12Q96R08 314 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 OR2D2Q9H210 308 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 KLK15Q9H2R5 256 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 METTL1Q9UBP6 276 aaKnown RBP7.36□□□□□ -1.23
PDPN-204ENST00000475043 DAPK2Q9UIK4 370 aa7.36□□□□□ -1.23
PDPN-204ENST00000475043 RRP15Q9Y3B9 282 aaKnown RBP7.36□□□□□ -1.23
PDPN-204ENST00000475043 TRBV6-7A0A0A0MS04 114 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 LOC100506127A0A0U1RQW1 187 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 FCN1O00602 326 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 IGLV1-40P01703 118 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 IGKV1-16P04430 117 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 CX3CL1P78423 397 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 NDPQ00604 133 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 MXD1Q05195 221 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 EGFEM1PQ0D2K5 195 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 TMEM267Q0VDI3 215 aaPredicted RBP7.35□□□□□ -1.23
PDPN-204ENST00000475043 ARL6IP1Q15041 203 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 PSG5Q15238 335 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 NEDD8Q15843 81 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 CDNFQ49AH0 187 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 ZNF660Q6AZW8 331 aaPredicted RBP7.35□□□□□ -1.23
PDPN-204ENST00000475043 PDPNQ86YL7 162 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 ZNF383Q8NA42 475 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 OR11H1Q8NG94 326 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 CASTOR1Q8WTX7 329 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 FLYWCH2Q96CP2 140 aaKnown RBP7.35□□□□□ -1.23
PDPN-204ENST00000475043 UBE2E2Q96LR5 201 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 TSNAXQ99598 290 aaKnown RBP7.35□□□□□ -1.23
PDPN-204ENST00000475043 RNF5Q99942 180 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 FAM103A1Q9BTL3 118 aaKnown RBP7.35□□□□□ -1.23
PDPN-204ENST00000475043 CABLES2Q9BTV7 478 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 OR51E2Q9H255 320 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 SLC35D1Q9NTN3 355 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 ELF5Q9UKW6 265 aaPredicted RBP7.35□□□□□ -1.23
PDPN-204ENST00000475043 VSIG4Q9Y279 399 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 FBXO7Q9Y3I1 522 aa7.35□□□□□ -1.23
PDPN-204ENST00000475043 WI2-2373I1.2A0A1W2PRP0 233 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 K7EIL1 84 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 SLC25A17O43808 307 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 CA2P00918 260 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 CD36P16671 472 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 SDC2P34741 201 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 RAB9AP51151 201 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 LUMP51884 338 aaPredicted RBP7.34□□□□□ -1.23
PDPN-204ENST00000475043 CBX3Q13185 183 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 ACTBL2Q562R1 376 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 SFXN4Q6P4A7 337 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 UNQ5815/PRO19632Q6UWF5 114 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 PPP1R27Q86WC6 154 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 ZNF491Q8N8L2 437 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 MINDY2Q8NBR6 621 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.34□□□□□ -1.23
PDPN-204ENST00000475043 LGALS14Q8TCE9 139 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 CENPOQ9BU64 300 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 ST6GALNAC5Q9BVH7 336 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 RNF167Q9H6Y7 350 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 GNB4Q9HAV0 340 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 SDHAF2Q9NX18 166 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 GAB2Q9UQC2 676 aa7.34□□□□□ -1.23
PDPN-204ENST00000475043 FOXA2Q9Y261 457 aaPredicted RBP7.34□□□□□ -1.23
PDPN-204ENST00000475043 IGKV1D-8A0A087WSZ0 117 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 TMEM235A6NFC5 223 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 SEC14L6B5MCN3 397 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 J3QRK9 145 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 SOX15O60248 233 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 SCGNO76038 276 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 SPDEFO95238 335 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 CNIH1O95406 144 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 DIRAS3O95661 229 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 CLEC2LP0C7M8 214 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 OR8U8P0C7N1 319 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 CD40LGP29965 261 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 GNG2P59768 71 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 GNB1P62873 340 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 ZNF616Q08AN1 781 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 KIAA0141Q14154 515 aaPredicted RBP7.33□□□□□ -1.24
PDPN-204ENST00000475043 IDNKQ5T6J7 187 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 C9orf66Q5T8R8 295 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 HACD4Q5VWC8 232 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 ZNF562Q6V9R5 426 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 TCTEX1D1Q8N7M0 179 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 BVESQ8NE79 360 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 LFNGQ8NES3 379 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 OR1N2Q8NGR9 330 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 GRPEL2Q8TAA5 225 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 MYOZ3Q8TDC0 251 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 NUDCD2Q8WVJ2 157 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 HARBI1Q96MB7 349 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 MS4A10Q96PG2 267 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 TOLLIPQ9H0E2 274 aa7.33□□□□□ -1.24
PDPN-204ENST00000475043 ZMAT5Q9UDW3 170 aaKnown RBP7.33□□□□□ -1.24
PDPN-204ENST00000475043 NUBP2Q9Y5Y2 271 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms