RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ZNF674Q2M3X9 581 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM268Q5VZI3 342 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 BTNL8Q6UX41 500 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 Q6ZRG5 221 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 C1orf87Q8N0U7 546 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 ZCCHC24Q8N2G6 241 aaKnown RBP3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 OR56B2PQ8NGI1 322 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 Q8TCH9 128 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 ITLN1Q8WWA0 313 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 HIST1H2AAQ96QV6 131 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 OR2V2Q96R30 315 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 TP53RKQ96S44 253 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 GPHA2Q96T91 129 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 NEU1Q99519 415 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF286AQ9HBT8 521 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 WFDC1Q9HC57 220 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 IL36RNQ9UBH0 155 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 NSG2Q9Y328 171 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PUS1Q9Y606 427 aaKnown RBP eCLIP3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PLCE1Q9P212 2302 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 TANC2Q9HCD6 1990 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 TEX15Q9BXT5 2789 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 C3orf85A0A1B0GTC6 90 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM210A6NLX4 147 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 UMAD1C9J7I0 102 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 MPPED1O15442 326 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 MLNRO43193 412 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 OR2C1O95371 312 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PPYP01298 95 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 SCTP09683 121 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 IRF2P14316 349 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 CA6P23280 308 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PAX6P26367 422 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 UCP3P55916 312 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF616Q08AN1 781 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PRDX4Q13162 271 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 SPIN3Q5JUX0 258 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 LGI3Q8N145 548 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 LRTM2Q8N967 370 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 MOB3AQ96BX8 217 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 TECTBQ96PL2 329 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 RTL8AQ9BWD3 113 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 FGF23Q9GZV9 251 aaPredicted RBP3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PLEKHA2Q9HB19 425 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM106BQ9NUM4 274 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 IL36GQ9NZH8 169 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 MTCH1Q9NZJ7 389 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PPP1R3CQ9UQK1 317 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 FBXO7Q9Y3I1 522 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 A0A096LNT2 108 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF732B4DXR9 585 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 FAM157AC9JC47 383 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 H0YL77 283 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 SMAD7O15105 426 aaKnown RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 ST8SIA3O43173 380 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 LY6HO94772 140 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 PTBP3O95758 552 aaKnown RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 TSPAN15O95858 294 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 MBP02144 154 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 GAPDHP04406 335 aaKnown RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 HERV-K104P61576 105 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 PKIAP61925 76 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 GNMTQ14749 295 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM155Q4W5P6 130 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 MIDNQ504T8 468 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF343Q6P1L6 599 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 ZDHHC23Q8IYP9 409 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 SLC35G3Q8N808 338 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 HSD17B11Q8NBQ5 300 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 CCL17Q92583 94 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 RAB39BQ96DA2 213 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 C1orf159Q96HA4 380 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 BPESC1Q9GZL8 116 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 GCM1Q9NP62 436 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 PARP11Q9NR21 331 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 FAM212BQ9NTI7 297 aaPredicted RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 RFNGQ9Y644 331 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 KPTNQ9Y664 436 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 CHD3Q12873 2000 aaKnown RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 POLQO75417 2590 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 BORCS7-ASMTA0A0B4J1R7 106 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 FAM24AA6NFZ4 105 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF705GA8MUZ8 300 aaPredicted RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 LYNX1G3V0Z9 82 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 TRAPPC2LH3BP13 241 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM178BH3BS89 294 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 PPP1R2P9O14990 202 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 CD5LO43866 347 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 GPR137BO60478 399 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 TK1P04183 234 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 LYNX1P0DP58 116 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF25P17030 456 aaPredicted RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 MDH2P40926 338 aaKnown RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 P2RY1P47900 373 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 GUK1Q16774 197 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 CEACAM21Q3KPI0 293 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 KHDC3LQ587J8 217 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 CXorf66Q5JRM2 361 aaPredicted RBP3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 GPR157Q5UAW9 335 aa3.47□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF818PQ6ZRF7 136 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms