RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SYNE2Q8WXH0 6885 aaKnown RBP1.58□□□□□ -2.16
CALD1-216ENST00000473714 TRAV8-6A0A0B4J262 113 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 IGHV2OR16-5A0A0B4J2B6 119 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 A0A0B4J2E0 115 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 KRTAP4-16G5E9R7 235 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 M0R1X1 148 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 TP53I11O14683 189 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 LIN7AO14910 233 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 CALUO43852 315 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 MED6O75586 246 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 GATBO75879 557 aaKnown RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 SCO1O75880 301 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 VAMP5O95183 116 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 FADS2O95864 444 aaKnown RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 OXTP01178 125 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 IGLV2-23P01705 113 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 OPN1SWP03999 348 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 OCMP0CE72 109 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 OR12D1P0DN82 309 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ZNF19P17023 458 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 IGFBP3P17936 291 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 CD40LGP29965 261 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 GNRHRP30968 328 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 SDC4P31431 198 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 RPA3P35244 121 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 GALR1P47211 349 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 KCNJ3P48549 501 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 XKP51811 444 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 RAB25P57735 213 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 OR12D2P58182 307 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 CDK5Q00535 292 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 PPIDQ08752 370 aaKnown RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 C2orf80Q0P641 193 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 DYNC1I2Q13409 638 aaKnown RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 OR1Q1Q15612 314 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 TRIP13Q15645 432 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 PSG3Q16557 428 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 RSPO1Q2MKA7 263 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 DEFB134Q4QY38 66 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 MPV17L2Q567V2 206 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 SYT6Q5T7P8 510 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 FBXW9Q5XUX1 488 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 LYPD2Q6UXB3 125 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 LRRN1Q6UXK5 716 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 IL34Q6ZMJ4 242 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 Q6ZT83 130 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 AHSA2Q719I0 299 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 LINC01551Q86U37 167 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 PDZD9Q8IXQ8 264 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 SELENOHQ8IZQ5 122 aaKnown RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 PGAM4Q8N0Y7 254 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 LGI3Q8N145 548 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 TMEM256Q8N2U0 113 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 C17orf78Q8N4C9 275 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ZNF433Q8N7K0 673 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 MORN4Q8NDC4 146 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 C19orf18Q8NEA5 215 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 OR10W1Q8NGF6 305 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 OR5M1Q8NGP8 315 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 NT5CQ8TCD5 201 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ZFAND1Q8TCF1 268 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 NELFBQ8WX92 580 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.57□□□□□ -2.16
CALD1-216ENST00000473714 GHSRQ92847 366 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 RAB8BQ92930 207 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 PPWD1Q96BP3 646 aaKnown RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 DCUN1D1Q96GG9 259 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 SNF8Q96H20 258 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ZNF681Q96N22 645 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 DCUN1D5Q9BTE7 237 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 RSG1Q9BU20 258 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 MRPL20Q9BYC9 149 aaKnown RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 DSN1Q9H410 356 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 FAM96AQ9H5X1 160 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ABCB9Q9NP78 766 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ACOT13Q9NPJ3 140 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 IFT46Q9NQC8 304 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 OR2S2Q9NQN1 319 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 DIABLOQ9NR28 239 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 PRTFDC1Q9NRG1 225 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 SDHAF3Q9NRP4 125 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 TREX1Q9NSU2 369 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 NLE1Q9NVX2 485 aaPredicted RBP1.57□□□□□ -2.16
CALD1-216ENST00000473714 RBM22Q9NW64 420 aaKnown RBP eCLIP1.57□□□□□ -2.16
CALD1-216ENST00000473714 RHBDL2Q9NX52 303 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 DNAJC27Q9NZQ0 273 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ZNF222Q9UK12 451 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 VPREB3Q9UKI3 123 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 SLC7A11Q9UPY5 501 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 ZNF337Q9Y3M9 751 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 MMACHCQ9Y4U1 282 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 KLF12Q9Y4X4 402 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 URGCP-MRPS24S4R325 110 aa1.57□□□□□ -2.16
CALD1-216ENST00000473714 IGLV1-50A0A075B6I6 118 aa1.56□□□□□ -2.16
CALD1-216ENST00000473714 IGLV3-16A0A075B6K0 115 aa1.56□□□□□ -2.16
CALD1-216ENST00000473714 A0A0A6YYD5 115 aa1.56□□□□□ -2.16
CALD1-216ENST00000473714 C17orf51A8MQB3 221 aa1.56□□□□□ -2.16
CALD1-216ENST00000473714 IQCF5A8MTL0 148 aa1.56□□□□□ -2.16
CALD1-216ENST00000473714 J3QT63 122 aa1.56□□□□□ -2.16
CALD1-216ENST00000473714 PSMD12O00232 456 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms