RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 THBS3P49746 956 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 LUMP51884 338 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-222ENST00000473373 DEFB136Q30KP8 78 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 UNQ5815/PRO19632Q6UWF5 114 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 CROCCP3Q8IVE0 287 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 NPBQ8NG41 125 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 OR5AN1Q8NGI8 311 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 HARBI1Q96MB7 349 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 OR5B12Q96R08 314 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 AGMATQ9BSE5 352 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 MCRIP2Q9BUT9 160 aaKnown RBP9.05□□□□□ -0.96
CPNE1-222ENST00000473373 IFT46Q9NQC8 304 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 NECAP2Q9NVZ3 263 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 SDHAF2Q9NX18 166 aa9.05□□□□□ -0.96
CPNE1-222ENST00000473373 IGHV7-81A0A0B4J1V7 117 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 TUSC2O75896 110 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 DIRAS3O95661 229 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 CA2P00918 260 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 IGHG4P01861 327 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 IGF1P05019 195 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 FCER2P06734 321 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 RRASP10301 218 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 SCAND1P57086 179 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 TAGLNQ01995 201 aaKnown RBP9.04□□□□□ -0.96
CPNE1-222ENST00000473373 FOXB2Q5VYV0 432 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 ZNF660Q6AZW8 331 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-222ENST00000473373 PPP1R27Q86WC6 154 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 MRPL41Q8IXM3 137 aaKnown RBP9.04□□□□□ -0.96
CPNE1-222ENST00000473373 ZNF383Q8NA42 475 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 BVESQ8NE79 360 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 OR5M8Q8NGP6 311 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 OR5H6Q8NGV6 325 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 GRPEL2Q8TAA5 225 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 ADTRPQ96IZ2 230 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 PHB2Q99623 299 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 RNF5Q99942 180 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 FAM103A1Q9BTL3 118 aaKnown RBP9.04□□□□□ -0.96
CPNE1-222ENST00000473373 DCSTAMPQ9H295 470 aa9.04□□□□□ -0.96
CPNE1-222ENST00000473373 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.04□□□□□ -0.96
CPNE1-222ENST00000473373 SPDEFO95238 335 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 IGKV1-16P04430 117 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 NFYAP23511 347 aaPredicted RBP9.03□□□□□ -0.96
CPNE1-222ENST00000473373 CDX1P47902 265 aaPredicted RBP9.03□□□□□ -0.96
CPNE1-222ENST00000473373 LINC00205P59089 165 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 CX3CL1P78423 397 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 PSG5Q15238 335 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 SRSF7Q16629 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
CPNE1-222ENST00000473373 VMA21Q3ZAQ7 101 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 ZNF260Q3ZCT1 412 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 ACTBL2Q562R1 376 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 H1FOOQ8IZA3 346 aaPredicted RBP9.03□□□□□ -0.96
CPNE1-222ENST00000473373 TCTEX1D1Q8N7M0 179 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 LINC00482Q8N8I6 264 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 S100A16Q96FQ6 103 aaKnown RBP9.03□□□□□ -0.96
CPNE1-222ENST00000473373 FOXA2Q9Y261 457 aaPredicted RBP9.03□□□□□ -0.96
CPNE1-222ENST00000473373 MRPS7Q9Y2R9 242 aaKnown RBP9.03□□□□□ -0.96
CPNE1-222ENST00000473373 PRELID3BQ9Y3B1 194 aa9.03□□□□□ -0.96
CPNE1-222ENST00000473373 IGKV1D-8A0A087WSZ0 117 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 MPPED1O15442 326 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 SLC22A5O76082 557 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 ACTL6BO94805 426 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 CRYZL1O95825 349 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 PSMB8P28062 276 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 HOXD3P31249 432 aaPredicted RBP9.02□□□□□ -0.97
CPNE1-222ENST00000473373 TGFBR1P36897 503 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 LGALS7P47929 136 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 TPPP2P59282 170 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 FXYD3Q14802 87 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 DEFB121Q5J5C9 76 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 OR2B11Q5JQS5 317 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 UBE2NLQ5JXB2 153 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 CNIH2Q6PI25 160 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 Q6ZS49 121 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 KCTD9Q7L273 389 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 ZNF645Q8N7E2 425 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 SAMD12Q8N8I0 201 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 BEST4Q8NFU0 473 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 OR11H1Q8NG94 326 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 ACOT12Q8WYK0 555 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 RAX2Q96IS3 184 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 MS4A10Q96PG2 267 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 AURKAIP1Q9NWT8 199 aaPredicted RBP9.02□□□□□ -0.97
CPNE1-222ENST00000473373 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
CPNE1-222ENST00000473373 ANXA10Q9UJ72 324 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 SPATA2Q9UM82 520 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 VSIG4Q9Y279 399 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 OR2W1Q9Y3N9 320 aa9.02□□□□□ -0.97
CPNE1-222ENST00000473373 NBEAL2Q6ZNJ1 2754 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 A0A0A6YYH2 397 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 MEIS3P1A6NDR6 274 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 A6NJ64 397 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 FCN1O00602 326 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 CREBL2O60519 120 aaPredicted RBP9.01□□□□□ -0.97
CPNE1-222ENST00000473373 FCGR3BO75015 233 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 TMEM127O75204 238 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 CBX5P45973 191 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 RAB9AP51151 201 aa9.01□□□□□ -0.97
CPNE1-222ENST00000473373 FXYD4P59646 89 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms