RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 SLC35D1Q9NTN3 355 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 EHFQ9NZC4 300 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 NDUFA13Q9P0J0 144 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-211ENST00000472490 J3QRK9 145 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 AP4M1O00189 453 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 CTDSP2O14595 271 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 FBXO24O75426 580 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 NDUFA3O95167 84 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 SPDEFO95238 335 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 LGALS7P47929 136 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 HERV-K104P61576 105 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 RPS16P62249 146 aaKnown RBP11.26□□□□□ -0.61
BRCA1-211ENST00000472490 SLC35B1P78383 322 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 SRSF4Q08170 494 aaKnown RBP11.26□□□□□ -0.61
BRCA1-211ENST00000472490 DYRK1AQ13627 763 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 PLGLAQ15195 96 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 ACTBL2Q562R1 376 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 LIN54Q6MZP7 749 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 DHRS11Q6UWP2 260 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 ZBTB34Q8NCN2 500 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 OR4X2Q8NGF9 303 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 OR6F1Q8NGZ6 308 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 MCFD2Q8NI22 146 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 DIRAS2Q96HU8 199 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 HSD17B10Q99714 261 aaKnown RBP11.26□□□□□ -0.61
BRCA1-211ENST00000472490 ZNF107Q9UII5 783 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-211ENST00000472490 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
BRCA1-211ENST00000472490 RRHO14718 337 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 PMP2P02689 132 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 AADACP22760 399 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 HLA-DMAP28067 261 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
BRCA1-211ENST00000472490 KRTAP10-3P60369 221 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 TSPAN5P62079 268 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 C5orf64Q2M2E5 130 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 C2orf68Q2NKX9 166 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 TMEM95Q3KNT9 176 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 PYHIN1Q6K0P9 492 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 OR5AU1Q8NGC0 362 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 RBM38Q9H0Z9 239 aaKnown RBP11.25□□□□□ -0.61
BRCA1-211ENST00000472490 MIXL1Q9H2W2 232 aa11.25□□□□□ -0.61
BRCA1-211ENST00000472490 RBMX2Q9Y388 322 aaKnown RBP11.25□□□□□ -0.61
BRCA1-211ENST00000472490 IGKV1D-13A0A0B4J2D9 117 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 PSMB11A5LHX3 300 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 GABARAPH6UMI1 98 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 OPN1MWP04001 364 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 IGKV1-16P04430 117 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 OPN1MW2P0DN77 364 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 OPN1MW3P0DN78 364 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 IGKV1-13P0DP09 117 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 TBPP20226 339 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 S100A5P33763 92 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 HRH1P35367 487 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 RFX2P48378 723 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 FXYD4P59646 89 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 IL18Q14116 193 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 ZNF66Q6ZN08 573 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 KCTD9Q7L273 389 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 TMEM17Q86X19 198 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 LYSMD2Q8IV50 215 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 SECTM1Q8WVN6 248 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 RITA1Q96K30 269 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 ABHD1Q96SE0 405 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 ZNF2Q9BSG1 426 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-211ENST00000472490 SLC5A7Q9GZV3 580 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 NXF2Q9GZY0 626 aaKnown RBP11.24□□□□□ -0.61
BRCA1-211ENST00000472490 MMP27Q9H306 513 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 A3GALT2U3KPV4 340 aa11.24□□□□□ -0.61
BRCA1-211ENST00000472490 CTDSPLO15194 276 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 SHOXO15266 292 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 IGLV2-14P01704 120 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 IFNA6P05013 189 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 VDAC1P21796 283 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 S100GP29377 79 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 LINC00205P59089 165 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 SSBP1Q04837 148 aaKnown RBP11.23□□□□□ -0.61
BRCA1-211ENST00000472490 CATR1Q13166 79 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 LPCAT3Q6P1A2 487 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 NDUFA11Q86Y39 141 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 STPG2Q8N412 459 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 BVESQ8NE79 360 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 OR52I2Q8NH67 350 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-211ENST00000472490 WIPF2Q8TF74 440 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-211ENST00000472490 DDB2Q92466 427 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 DGCR14Q96DF8 476 aaKnown RBP11.23□□□□□ -0.61
BRCA1-211ENST00000472490 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 METTL1Q9UBP6 276 aaKnown RBP11.23□□□□□ -0.61
BRCA1-211ENST00000472490 KLK11Q9UBX7 282 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 MTFP1Q9UDX5 166 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
BRCA1-211ENST00000472490 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
BRCA1-211ENST00000472490 IGF1P05019 195 aa11.22□□□□□ -0.61
BRCA1-211ENST00000472490 CNTFRP26992 372 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms