RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
CLRN1-205ENST00000472224 MRPS7Q9Y2R9 242 aaKnown RBP9.38□□□□□ -0.91
CLRN1-205ENST00000472224 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
CLRN1-205ENST00000472224 SMIM31A0A1B0GVY4 71 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 IGHG2P01859 326 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 MC5RP33032 325 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 SOX6P35712 828 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 CBX5P45973 191 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 LUMP51884 338 aaPredicted RBP9.37□□□□□ -0.91
CLRN1-205ENST00000472224 RPS16P62249 146 aaKnown RBP9.37□□□□□ -0.91
CLRN1-205ENST00000472224 CBX3Q13185 183 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 SPCS2Q15005 226 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 RNASE12Q5GAN4 147 aaKnown RBP9.37□□□□□ -0.91
CLRN1-205ENST00000472224 HOGA1Q86XE5 327 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 SNX29P2Q8IUI4 249 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 OR5AN1Q8NGI8 311 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 ABHD5Q8WTS1 349 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 CHPT1Q8WUD6 406 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 ACOT12Q8WYK0 555 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 C5orf30Q96GV9 206 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 TOLLIPQ9H0E2 274 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 FBXL15Q9H469 300 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 PARP11Q9NR21 331 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 SCOCQ9UIL1 159 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
CLRN1-205ENST00000472224 IGKV1D-13A0A0B4J2D9 117 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 AP4M1O00189 453 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 PROP1O75360 226 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 TUSC2O75896 110 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 APOA1P02647 267 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 OPN1MWP04001 364 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 IGKV1-16P04430 117 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 OPN1MW2P0DN77 364 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 OPN1MW3P0DN78 364 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 IGKV1-13P0DP09 117 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 ZNF182P17025 639 aaPredicted RBP9.36□□□□□ -0.91
CLRN1-205ENST00000472224 ELK1P19419 428 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 RPL5P46777 297 aaKnown RBP9.36□□□□□ -0.91
CLRN1-205ENST00000472224 FXYD4P59646 89 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 SLC35B1P78383 322 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 C5orf64Q2M2E5 130 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 PDPNQ86YL7 162 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 STPG2Q8N412 459 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 WIPF2Q8TF74 440 aaPredicted RBP9.36□□□□□ -0.91
CLRN1-205ENST00000472224 RAB2BQ8WUD1 216 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 CLCC1Q96S66 551 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 NECAP2Q9NVZ3 263 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 OR2W1Q9Y3N9 320 aa9.36□□□□□ -0.91
CLRN1-205ENST00000472224 CCDC160A6NGH7 325 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 G3V4G9 280 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 RRHO14718 337 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 RGS5O15539 181 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 RBBP9O75884 186 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 OR5H8P0DN80 308 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 PF4V1P10720 104 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 VDAC1P21796 283 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 AADACP22760 399 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 FCGR2CP31995 323 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 PRSS3P35030 304 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 THBS3P49746 956 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 CDK10Q15131 360 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 RTL8BQ17RB0 113 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 OR2B11Q5JQS5 317 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 KPRPQ5T749 579 aaPredicted RBP9.35□□□□□ -0.91
CLRN1-205ENST00000472224 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 BVESQ8NE79 360 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 SECTM1Q8WVN6 248 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 SNAPC3Q92966 411 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 R3HDM4Q96D70 268 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 HARBI1Q96MB7 349 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 TSNAXQ99598 290 aaKnown RBP9.35□□□□□ -0.91
CLRN1-205ENST00000472224 EHFQ9NZC4 300 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 METTL1Q9UBP6 276 aaKnown RBP9.35□□□□□ -0.91
CLRN1-205ENST00000472224 EXTL2Q9UBQ6 330 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 NOTCH3Q9UM47 2321 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 TSSC4Q9Y5U2 329 aaPredicted RBP9.35□□□□□ -0.91
CLRN1-205ENST00000472224 A3GALT2U3KPV4 340 aa9.35□□□□□ -0.91
CLRN1-205ENST00000472224 TNCP24821 2201 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 NUDT19A8MXV4 375 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 ATP6V0E1O15342 81 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 SLC25A17O43808 307 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 NDUFA3O95167 84 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 HLA-DRB1P01911 266 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 PMP2P02689 132 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 TMBIM6P55061 237 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 ECSCRQ19T08 205 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 TCTEX1D4Q5JR98 221 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 LIN54Q6MZP7 749 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 KCTD9Q7L273 389 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 TMEM17Q86X19 198 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 NPBQ8NG41 125 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 OR5H2Q8NGV7 314 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 ISOC1Q96CN7 298 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 FLYWCH2Q96CP2 140 aaKnown RBP9.34□□□□□ -0.91
CLRN1-205ENST00000472224 ADTRPQ96IZ2 230 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 TPSG1Q9NRR2 321 aa9.34□□□□□ -0.91
CLRN1-205ENST00000472224 DNAH9Q9NYC9 4486 aa9.33□□□□□ -0.92
CLRN1-205ENST00000472224 IGHV7-81A0A0B4J1V7 117 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms