RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 FAM71E2Q8N5Q1 922 aa14.39□□□□□ -0.11
HSPG2-208ENST00000471322 RNASE11Q8TAA1 199 aaKnown RBP14.39□□□□□ -0.11
HSPG2-208ENST00000471322 CD300LFQ8TDQ1 290 aa14.39□□□□□ -0.11
HSPG2-208ENST00000471322 RRNAD1Q96FB5 475 aaKnown RBP14.39□□□□□ -0.11
HSPG2-208ENST00000471322 REG4Q9BYZ8 158 aa14.39□□□□□ -0.11
HSPG2-208ENST00000471322 SDHAF2Q9NX18 166 aa14.39□□□□□ -0.11
HSPG2-208ENST00000471322 NIPBLQ6KC79 2804 aaeCLIP14.38□□□□□ -0.111e-8■■■■■ 61.2
HSPG2-208ENST00000471322 MEX3AA1L020 520 aaKnown RBP14.38□□□□□ -0.11
HSPG2-208ENST00000471322 TAAR5O14804 337 aa14.38□□□□□ -0.11
HSPG2-208ENST00000471322 ST8SIA5O15466 376 aa14.38□□□□□ -0.11
HSPG2-208ENST00000471322 PVALBP20472 110 aaPredicted RBP14.38□□□□□ -0.11
HSPG2-208ENST00000471322 PDLIM4P50479 330 aa14.38□□□□□ -0.11
HSPG2-208ENST00000471322 ZNF585BQ52M93 769 aa14.38□□□□□ -0.11
HSPG2-208ENST00000471322 C10orf105Q8TEF2 133 aa14.38□□□□□ -0.11
HSPG2-208ENST00000471322 KIAA2026Q5HYC2 2103 aa14.38□□□□□ -0.11
HSPG2-208ENST00000471322 F5H0A9 414 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 CFDP00746 253 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 RPL12P30050 165 aaKnown RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 GPR157Q5UAW9 335 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 FAM53AQ6NSI3 398 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 TCF23Q7RTU1 214 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 FAM219AQ8IW50 185 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 OR8H3Q8N146 312 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 RAB39BQ96DA2 213 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 GSX1Q9H4S2 264 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 ZC4H2Q9NQZ6 224 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 MMP9P14780 707 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 OMGP23515 440 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 LPAR6P43657 344 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 P2RY1P47900 373 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 Q3ZCU0 254 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 SCARB1Q8WTV0 552 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 TCTEX1D2Q8WW35 142 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 PHYHIPLQ96FC7 376 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 ABHD14AQ9BUJ0 271 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 ZNF471Q9BX82 626 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 BPESC1Q9GZL8 116 aa14.37□□□□□ -0.11
HSPG2-208ENST00000471322 RPUSD1Q9UJJ7 312 aaKnown RBP14.37□□□□□ -0.11
HSPG2-208ENST00000471322 DVL1O14640 695 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 GPR37O15354 613 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 HKR1P10072 659 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 AKR1C2P52895 323 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 DSCR9P59020 149 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 EIF5AP63241 154 aaKnown RBP14.36□□□□□ -0.11
HSPG2-208ENST00000471322 ID3Q02535 119 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 LYPD2Q6UXB3 125 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 Q71RC1 249 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-208ENST00000471322 SLC7A5P1Q8MH63 180 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 ST8SIA2Q92186 375 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 GPR146Q96CH1 333 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 C5orf30Q96GV9 206 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 ZNF714Q96N38 554 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 PIMREGQ9BSJ6 248 aa14.36□□□□□ -0.11
HSPG2-208ENST00000471322 SETD2Q9BYW2 2564 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-208ENST00000471322 TRBV23-1A0A0A0MS06 115 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 PITX3O75364 302 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 IGKV1-39P01597 117 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 IGKV1D-39P04432 117 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 CLLU1Q5K131 121 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 TMEM200BQ69YZ2 307 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 HEPN1Q6WQI6 88 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 SPAG16Q8N0X2 631 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 STOML3Q8TAV4 291 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 TIMD4Q96H15 378 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 IFI27L2Q9H2X8 130 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 NARFLQ9H6Q4 476 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 C19orf12Q9NSK7 152 aa14.35□□□□□ -0.11
HSPG2-208ENST00000471322 MSGN1A6NI15 193 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 RAB29O14966 203 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 KCNAB3O43448 404 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 GPR137BO60478 399 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 SPDEFO95238 335 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 NFYBP25208 207 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 KIR2DS2P43631 304 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 RPL30P62888 115 aaKnown RBP14.34□□□□□ -0.11
HSPG2-208ENST00000471322 FGFRL1Q8N441 504 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 H1FXQ92522 213 aaKnown RBP14.34□□□□□ -0.11
HSPG2-208ENST00000471322 COA4Q9NYJ1 87 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 PRELID3BQ9Y3B1 194 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 MMP24Q9Y5R2 645 aa14.34□□□□□ -0.11
HSPG2-208ENST00000471322 IGHV4-61A0A0C4DH41 118 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 WRBO00258 174 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 RBFOX2O43251 390 aaKnown RBP eCLIP14.33□□□□□ -0.11
HSPG2-208ENST00000471322 IGKV1-5P01602 117 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 IGHV2-70P01814 119 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.11
HSPG2-208ENST00000471322 DUTP33316 252 aaKnown RBP14.33□□□□□ -0.11
HSPG2-208ENST00000471322 ZNF134P52741 427 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 VAMP2P63027 116 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 CT45A1Q5HYN5 189 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 BTNL3Q6UXE8 466 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 CT45A3Q8NHU0 189 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 RAB1CQ92928 201 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 ADTRPQ96IZ2 230 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 CTSZQ9UBR2 303 aa14.33□□□□□ -0.11
HSPG2-208ENST00000471322 RCL1Q9Y2P8 373 aaKnown RBP14.33□□□□□ -0.11
HSPG2-208ENST00000471322 VWC2LB2RUY7 222 aa14.33□□□□□ -0.12
HSPG2-208ENST00000471322 M0R1X1 148 aa14.33□□□□□ -0.12
HSPG2-208ENST00000471322 PPIHO43447 177 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms