RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 RAB29O14966 203 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 MPPED1O15442 326 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 ATG12O94817 140 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 SFT2D2O95562 160 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 IFNA2P01563 188 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 OR8U9P0C7N5 309 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 VSIG10L2P0DP72 767 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 NFYBP25208 207 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 IL3RAP26951 378 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 CD34P28906 385 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 GNRHRP30968 328 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 PPP1CCP36873 323 aaKnown RBP5.43□□□□□ -1.54
VAMP3-202ENST00000470357 GPR12P47775 334 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 PRRX1P54821 245 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 RRAS2P62070 204 aaPredicted RBP5.43□□□□□ -1.54
VAMP3-202ENST00000470357 BAMBIQ13145 260 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 ZNF273Q14593 569 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 CLEC12BQ2HXU8 276 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 TMEM95Q3KNT9 176 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 TMEM177Q53S58 311 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 LIN54Q6MZP7 749 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 BTNL3Q6UXE8 466 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 ZNF66Q6ZN08 573 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 TCF23Q7RTU1 214 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 AKAP14Q86UN6 197 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 CADM3Q8N126 398 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 C12orf45Q8N5I9 185 aaPredicted RBP5.43□□□□□ -1.54
VAMP3-202ENST00000470357 OR52L2PQ8NGH6 319 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 OR8U1Q8NH10 309 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 OR9G1Q8NH87 305 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 CLDND2Q8NHS1 167 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 CD300LFQ8TDQ1 290 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 MITD1Q8WV92 249 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 ADTRPQ96IZ2 230 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 S1PR3Q99500 378 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 ABHD14AQ9BUJ0 271 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 NAA60Q9H7X0 242 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 METTL8Q9H825 291 aaKnown RBP5.43□□□□□ -1.54
VAMP3-202ENST00000470357 HEXA-AS1Q9H8Q6 139 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 FAM212BQ9NTI7 297 aaPredicted RBP5.43□□□□□ -1.54
VAMP3-202ENST00000470357 LIN7CQ9NUP9 197 aaKnown RBP5.43□□□□□ -1.54
VAMP3-202ENST00000470357 PIPOXQ9P0Z9 390 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 KPTNQ9Y664 436 aa5.43□□□□□ -1.54
VAMP3-202ENST00000470357 A0A0B4J293 547 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 IGKV1D-13A0A0B4J2D9 117 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 C3orf85A0A1B0GTC6 90 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 DUXBA0A1W2PPF3 345 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 H0Y980 276 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 TOR1AO14656 332 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 HSD17B6O14756 317 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 CRLF1O75462 422 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 IFNA21P01568 189 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 IGHV1-8P0DP01 117 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 IGKV1-13P0DP09 117 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 RPA2P15927 270 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 CCL3L1P16619 93 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 USF1P22415 310 aaPredicted RBP5.42□□□□□ -1.54
VAMP3-202ENST00000470357 OMGP23515 440 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 GATA3P23771 443 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 F2RP25116 425 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 KIR2DS2P43631 304 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 DLX6P56179 175 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 LMO4P61968 165 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 KRTAP1-1Q07627 177 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 PPP1R1AQ13522 171 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 GNMTQ14749 295 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 LTC4SQ16873 150 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 PHLDA2Q53GA4 152 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 PRAMEF5Q5TYX0 476 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 NCR3LG1Q68D85 454 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 FAM71F2Q6NXP2 309 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 ZNF818PQ6ZRF7 136 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 SLC25A48Q6ZT89 311 aaKnown RBP5.42□□□□□ -1.54
VAMP3-202ENST00000470357 LDLRAD3Q86YD5 345 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 LGI3Q8N145 548 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 LINC00311Q8N616 119 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 DRAM1Q8N682 238 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 ADAD2Q8NCV1 583 aaKnown RBP5.42□□□□□ -1.54
VAMP3-202ENST00000470357 OR13D1Q8NGV5 346 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 UBALD1Q8TB05 177 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 ZNF596Q8TC21 504 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 CAPSLQ8WWF8 208 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 IL22RA2Q969J5 263 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 TMEM230Q96A57 120 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 SEC22CQ9BRL7 303 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 CLEC7AQ9BXN2 247 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 BEX2Q9BXY8 128 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 OR2D2Q9H210 308 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 TMEM133Q9H2Q1 129 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 NARFLQ9H6Q4 476 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 UNKLQ9H9P5 680 aaKnown RBP5.42□□□□□ -1.54
VAMP3-202ENST00000470357 BEX1Q9HBH7 125 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 RAB18Q9NP72 206 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 CCL28Q9NRJ3 127 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 ONECUT1Q9UBC0 465 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 PSG11Q9UQ72 335 aa5.42□□□□□ -1.54
VAMP3-202ENST00000470357 AMMECR1Q9Y4X0 333 aaPredicted RBP5.42□□□□□ -1.54
VAMP3-202ENST00000470357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.41□□□□□ -1.542e-8■■■□□ 17.7
VAMP3-202ENST00000470357 IGHV3-43A0A0B4J1X8 118 aa5.41□□□□□ -1.54
VAMP3-202ENST00000470357 IGHV2-70DA0A0C4DH43 119 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms