RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 DDB2Q92466 427 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 FYTTD1Q96QD9 318 aaKnown RBP12.32□□□□□ -0.44
COL4A5-203ENST00000470339 TRAV20A0A0B4J274 112 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 C5orf51A6NDU8 294 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 BUB1B-PAK6H3BSN5 160 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 ADAP1O75689 374 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 TOX4O94842 621 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 SIX6O95475 246 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 MSMBP08118 114 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 HOXB5P09067 269 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 BRWD1-AS2P59051 145 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 CD300CQ08708 224 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 DCAF12L2Q5VW00 463 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 LYZL2Q7Z4W2 148 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 VMO1Q7Z5L0 202 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 SPAG16Q8N0X2 631 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 PNKDQ8N490 385 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 SLC35G3Q8N808 338 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 LSM10Q969L4 123 aaKnown RBP12.31□□□□□ -0.44
COL4A5-203ENST00000470339 C2orf50Q96LR7 162 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 PCGF1Q9BSM1 259 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 REG4Q9BYZ8 158 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 NMES1Q9C002 83 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 PDZD2O15018 2839 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 ITPR2Q14571 2701 aa12.31□□□□□ -0.44
COL4A5-203ENST00000470339 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 LY6LH3BQJ8 138 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 TXNL1O43396 289 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 HNRNPCP07910 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL4A5-203ENST00000470339 CT45A6P0DMU7 189 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 CT45A5P0DMU8 189 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 CT45A7P0DMV0 189 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 RRASP10301 218 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 SLC25A6P12236 298 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 LPAR6P43657 344 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 DHRS7BQ6IAN0 325 aaPredicted RBP12.3□□□□□ -0.44
COL4A5-203ENST00000470339 HCP5Q6MZN7 132 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 KRTAP1-3Q8IUG1 177 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 LINC01356Q8N9X3 169 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 FOXC2Q99958 501 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 PDCD10Q9BUL8 212 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 CHIAQ9BZP6 476 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 RANBP3Q9H6Z4 567 aaPredicted RBP12.3□□□□□ -0.44
COL4A5-203ENST00000470339 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 ZNRD1Q9P1U0 126 aa12.3□□□□□ -0.44
COL4A5-203ENST00000470339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL4A5-203ENST00000470339 CR1P17927 2039 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 C13orf42A0A1B0GVH6 325 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 FAM25EA8MYX2 175 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 CCSO14618 274 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 HPRT1P00492 218 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 C1QBP02746 253 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 GAPDHP04406 335 aaKnown RBP12.29□□□□□ -0.44
COL4A5-203ENST00000470339 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 COX7A1P24310 79 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 HTR1DP28221 377 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 CEACAM3P40198 252 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 UBE2E1P51965 193 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 FGL1Q08830 312 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 ZNF816Q0VGE8 651 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-203ENST00000470339 NMSQ5H8A3 153 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 TGIF2LXQ8IUE1 241 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 FAM219AQ8IW50 185 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 ZNF383Q8NA42 475 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 DRAXINQ8NBI3 349 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-203ENST00000470339 OR5AN1Q8NGI8 311 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 OR4P4Q8NGL7 312 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 OR4S2Q8NH73 311 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 TBX15Q96SF7 602 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 SPIN2AQ99865 258 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 SPIN2BQ9BPZ2 258 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 COMMD9Q9P000 198 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 MAST4O15021 2626 aa12.29□□□□□ -0.44
COL4A5-203ENST00000470339 LEUTXA8MZ59 168 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 OOSP1A8MZH6 123 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 RNASEK-C17orf49H0YIS7 233 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 RAMP3O60896 148 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 FCGR3BO75015 233 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 ARG1P05089 322 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-203ENST00000470339 EPHA1P21709 976 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 MC5RP33032 325 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 IL15RAQ13261 267 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 IAH1Q2TAA2 248 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-203ENST00000470339 ZFP69Q49AA0 526 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 MINOS1Q5TGZ0 78 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 RRNAD1Q96FB5 475 aaKnown RBP12.28□□□□□ -0.44
COL4A5-203ENST00000470339 SEC22AQ96IW7 307 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 OR10C1Q96KK4 312 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 NABP2Q9BQ15 211 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 AIFM2Q9BRQ8 373 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 LPAR2Q9HBW0 351 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 DPM3Q9P2X0 92 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 MINOS1-NBL1R4GNA1 71 aa12.28□□□□□ -0.44
COL4A5-203ENST00000470339 PRRC2AP48634 2157 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms