RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 GSTT2BP0CG30 244 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 HIST1H1DP16402 221 aaKnown RBP12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 TMBIM6P55061 237 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 CX3CL1P78423 397 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 NDPQ00604 133 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 KIAA0141Q14154 515 aaPredicted RBP12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 ZNF383Q8NA42 475 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 MYOZ3Q8TDC0 251 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 C4orf3Q8WVX3 66 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 DPF1Q92782 380 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 SLC25A46Q96AG3 418 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 TOLLIPQ9H0E2 274 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 FBXO7Q9Y3I1 522 aa12.78□□□□□ -0.36
GTF3C2-209ENST00000470115 TRBV6-7A0A0A0MS04 114 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 OR8U9P0C7N5 309 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 RORCP51449 518 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 RPS16P62249 146 aaKnown RBP12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 ARFRP1Q13795 201 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 PSG5Q15238 335 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 DEFB121Q5J5C9 76 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 ZNF660Q6AZW8 331 aaPredicted RBP12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 ZNF491Q8N8L2 437 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 MINDY2Q8NBR6 621 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 OR10J5Q8NHC4 309 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 CLCC1Q96S66 551 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 RNF5Q99942 180 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 CABLES2Q9BTV7 478 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 ELF5Q9UKW6 265 aaPredicted RBP12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 GAB2Q9UQC2 676 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 A3GALT2U3KPV4 340 aa12.77□□□□□ -0.37
GTF3C2-209ENST00000470115 M0R1X1 148 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 IGKV1-16P04430 117 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 EGR2P11161 476 aaPredicted RBP12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 TALDO1P37837 337 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 RAB9AP51151 201 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 SPCS2Q15005 226 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 ECSCRQ19T08 205 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 CDNFQ49AH0 187 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 C19orf54Q5BKX5 351 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 OR5M8Q8NGP6 311 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 OR5H6Q8NGV6 325 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 ISOC1Q96CN7 298 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 UBE2E2Q96LR5 201 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 OR5B12Q96R08 314 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 BCL7BQ9BQE9 202 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 GNB4Q9HAV0 340 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 NUBP2Q9Y5Y2 271 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 ETV7Q9Y603 341 aa12.76□□□□□ -0.37
GTF3C2-209ENST00000470115 I3L521 148 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 APOA2P02652 100 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 OR11H1Q8NG94 326 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 ABHD5Q8WTS1 349 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 TSNAXQ99598 290 aaKnown RBP12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 OR2D2Q9H210 308 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 RHBDL2Q9NX52 303 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 COMMD3Q9UBI1 195 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 VSIG4Q9Y279 399 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 CEPT1Q9Y6K0 416 aa12.75□□□□□ -0.37
GTF3C2-209ENST00000470115 IGKV1D-8A0A087WSZ0 117 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 A0A1W2PN81 502 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 H3BMQ9 156 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 SOX15O60248 233 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 TMEM127O75204 238 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 DIRAS3O95661 229 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 CHRNA7P36544 502 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 SCAND1P57086 179 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 FHL3Q13643 280 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 PPP1R27Q86WC6 154 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 PDPNQ86YL7 162 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 SAMD12Q8N8I0 201 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 OR1N2Q8NGR9 330 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 AP3S1Q92572 193 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 FLYWCH2Q96CP2 140 aaKnown RBP12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 C5orf30Q96GV9 206 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 FAM103A1Q9BTL3 118 aaKnown RBP12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 SLC35D1Q9NTN3 355 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 SDHAF2Q9NX18 166 aa12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 FOXA2Q9Y261 457 aaPredicted RBP12.74□□□□□ -0.37
GTF3C2-209ENST00000470115 COL7A1Q02388 2944 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 SLC25A17O43808 307 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 CA2P00918 260 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 LUMP51884 338 aaPredicted RBP12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 GNB1P62873 340 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 RUNX1Q01196 453 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 TMEM267Q0VDI3 215 aaPredicted RBP12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 ARL6IP1Q15041 203 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 SRSF7Q16629 238 aaKnown RBP eCLIP12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 ZNF562Q6V9R5 426 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 Q6ZS49 121 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 TPSG1Q9NRR2 321 aa12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 RSL24D1Q9UHA3 163 aaKnown RBP12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 SPATA2Q9UM82 520 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms