RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 ZNF137PP52743 207 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 H2BFSP57053 126 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 CD83Q01151 205 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 DCAF12L2Q5VW00 463 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 LYZL2Q7Z4W2 148 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 LGI3Q8N145 548 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 ZNF383Q8NA42 475 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 DDB2Q92466 427 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 WDR89Q96FK6 387 aaPredicted RBP10.42□□□□□ -0.74
RUNX1-213ENST00000469087 HIF1ANQ9NWT6 349 aa10.42□□□□□ -0.74
RUNX1-213ENST00000469087 A0A1W2PRD5 423 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 A0A1W2PRF3 423 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 A0A1W2PRM7 423 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 MPTX1A8MV57 137 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 ODF3BA8MYP8 253 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 LY6LH3BQJ8 138 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 B3GALNT1O75752 331 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 SERPINE2P07093 398 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 HOXB5P09067 269 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 CATR1Q13166 79 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 TMEM249Q2WGJ8 235 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 TMEM268Q5VZI3 342 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 SELENOHQ8IZQ5 122 aaKnown RBP10.41□□□□□ -0.74
RUNX1-213ENST00000469087 SPAG16Q8N0X2 631 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 CIARTQ8N365 385 aaPredicted RBP10.41□□□□□ -0.74
RUNX1-213ENST00000469087 LHX4Q969G2 390 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 C18orf12Q96KH6 178 aa10.41□□□□□ -0.74
RUNX1-213ENST00000469087 FYTTD1Q96QD9 318 aaKnown RBP10.41□□□□□ -0.74
RUNX1-213ENST00000469087 RANGRFQ9HD47 186 aaPredicted RBP10.41□□□□□ -0.74
RUNX1-213ENST00000469087 LIN7CQ9NUP9 197 aaKnown RBP10.41□□□□□ -0.74
RUNX1-213ENST00000469087 TGFAP01135 160 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 IGHV4-31P0DP07 118 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 LPAR6P43657 344 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 LHFPL4Q7Z7J7 247 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 AKAP14Q86UN6 197 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 ZNF695Q8IW36 515 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 SLC35G3Q8N808 338 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 SEC22AQ96IW7 307 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 RAB18Q9NP72 206 aa10.4□□□□□ -0.74
RUNX1-213ENST00000469087 ZNF469Q96JG9 3925 aaPredicted RBP10.4□□□□□ -0.75
RUNX1-213ENST00000469087 TRAV20A0A0B4J274 112 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 FCGR3BO75015 233 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 OR2A4O95047 310 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 AVPP01185 164 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 IL3RAP26951 378 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 HTR1DP28221 377 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 THBS3P49746 956 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 UBE2E1P51965 193 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 ZNF816Q0VGE8 651 aaPredicted RBP10.39□□□□□ -0.75
RUNX1-213ENST00000469087 TCTEX1D1Q8N7M0 179 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 OR5M8Q8NGP6 311 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 RBPMSQ93062 196 aaKnown RBP10.39□□□□□ -0.75
RUNX1-213ENST00000469087 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 OR2A7Q96R45 310 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 MRPL20Q9BYC9 149 aaKnown RBP10.39□□□□□ -0.75
RUNX1-213ENST00000469087 CHIAQ9BZP6 476 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 ZNF436Q9C0F3 470 aaPredicted RBP10.39□□□□□ -0.75
RUNX1-213ENST00000469087 C7orf69Q9H7B7 122 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 PRELID3BQ9Y3B1 194 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 AUP1Q9Y679 476 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 ZANQ9Y493 2812 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 C13orf42A0A1B0GVH6 325 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 FAM25EA8MYX2 175 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 SRPXP78539 464 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 TGIF2LXQ8IUE1 241 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 C17orf50Q8WW18 174 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 IL22RA2Q969J5 263 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 ADTRPQ96IZ2 230 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 NABP2Q9BQ15 211 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 FAM212BQ9NTI7 297 aaPredicted RBP10.39□□□□□ -0.75
RUNX1-213ENST00000469087 DPM3Q9P2X0 92 aa10.39□□□□□ -0.75
RUNX1-213ENST00000469087 C5orf51A6NDU8 294 aa10.38□□□□□ -0.75
RUNX1-213ENST00000469087 LEUTXA8MZ59 168 aa10.38□□□□□ -0.75
RUNX1-213ENST00000469087 S1PR2O95136 353 aa10.38□□□□□ -0.75
RUNX1-213ENST00000469087 GAPDHP04406 335 aaKnown RBP10.38□□□□□ -0.75
RUNX1-213ENST00000469087 GATA3P23771 443 aa10.38□□□□□ -0.75
RUNX1-213ENST00000469087 PAX6P26367 422 aa10.38□□□□□ -0.75
RUNX1-213ENST00000469087 OR5AN1Q8NGI8 311 aa10.38□□□□□ -0.75
RUNX1-213ENST00000469087 CD300LFQ8TDQ1 290 aa10.38□□□□□ -0.75
RUNX1-213ENST00000469087 AMMECR1Q9Y4X0 333 aaPredicted RBP10.38□□□□□ -0.75
RUNX1-213ENST00000469087 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■□□□ 13.9
RUNX1-213ENST00000469087 AKAP9Q99996 3911 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 IGHV1-3A0A0C4DH29 117 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 RBFOX2O43251 390 aaKnown RBP eCLIP10.37□□□□□ -0.75
RUNX1-213ENST00000469087 HPRT1P00492 218 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 IGKV1-5P01602 117 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 IGKV1-16P04430 117 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 RPA2P15927 270 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 TPTE2P1Q5T6R2 138 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 DYNAPQ8N1N2 210 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 RPEQ96AT9 228 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 AJUBAQ96IF1 538 aa10.37□□□□□ -0.75
RUNX1-213ENST00000469087 ITGB1BP2Q9UKP3 347 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms