RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 CCDC127Q96BQ5 260 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 EBNA1BP2Q99848 306 aaKnown RBP-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 OR8D2Q9GZM6 311 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 CHST6Q9GZX3 395 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 RWDD1Q9H446 243 aaPredicted RBP-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 HAUS4Q9H6D7 363 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 SPACA1Q9HBV2 294 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 MAT2BQ9NZL9 334 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 DNAJC27Q9NZQ0 273 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 TMEM14CQ9P0S9 112 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 PIN4Q9Y237 131 aaKnown RBP-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 POLR1DQ9Y2S0 133 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 PCNX1Q96RV3 2341 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 MYO7BQ6PIF6 2116 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 NHSL1Q5SYE7 1610 aa-1.15□□□□□ -2.59
SHQ1-204ENST00000468347 SPTBN4Q9H254 2564 aa-1.16□□□□□ -2.59
SHQ1-204ENST00000468347 MYH7BA7E2Y1 1941 aa-1.16□□□□□ -2.59
SHQ1-204ENST00000468347 PTPRDP23468 1912 aa-1.16□□□□□ -2.59
SHQ1-204ENST00000468347 ABCC12Q96J65 1359 aa-1.16□□□□□ -2.59
SHQ1-204ENST00000468347 A0A087WUU8 490 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 OR2AG2A6NM03 316 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 TRDMT1O14717 391 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 BCKDKO14874 412 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 DENRO43583 198 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 NOS1APO75052 506 aaPredicted RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 UPK1BO75841 260 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 SCGNO76038 276 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 TTC4O95801 387 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 TCL1BO95988 128 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 AGTP01019 485 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 REG1AP05451 166 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 UCHL1P09936 223 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 ZNF24P17028 368 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 F8A1P23610 371 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 CD24P25063 80 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 ACAA2P42765 397 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 CRATP43155 626 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 EIF2B2P49770 351 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 RBM11P57052 281 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 FXYD4P59646 89 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 FGF12P61328 243 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 BST2Q10589 180 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 CCDC152Q4G0S7 254 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 CDKL4Q5MAI5 379 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 RNASEKQ6P5S7 137 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 AMTNQ6UX39 209 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 SETD3Q86TU7 594 aaPredicted RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 C1orf174Q8IYL3 243 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 BBOF1Q8ND07 529 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 OR51L1Q8NGJ5 315 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 OR5D18Q8NGL1 313 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 OR4A4PQ8NGN8 299 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 ACOT12Q8WYK0 555 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 PSMF1Q92530 271 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 PPWD1Q96BP3 646 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 DTNBP1Q96EV8 351 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 C16orf45Q96MC5 204 aaPredicted RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 CALN1Q9BXU9 219 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 ZYG11BQ9C0D3 744 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 IMUPQ9GZP8 106 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 OR2AG1Q9H205 316 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 OR51V1Q9H2C8 321 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 BLZF1Q9H2G9 400 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 SLC38A1Q9H2H9 487 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 GOLPH3Q9H4A6 298 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 C8orf33Q9H7E9 229 aaPredicted RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 HES4Q9HCC6 221 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 C12orf4Q9NQ89 552 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 ZMAT5Q9UDW3 170 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 CD300AQ9UGN4 299 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 SCML1Q9UN30 329 aa-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 RBMX2Q9Y388 322 aaKnown RBP-1.16□□□□□ -2.6
SHQ1-204ENST00000468347 ATG2AQ2TAZ0 1938 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MYH9P35579 1960 aaKnown RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 LAMA1P25391 3075 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 PLXNA1Q9UIW2 1896 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 TRBV9A0A0B4J1U6 114 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 TMEM269A0A1B0GVZ9 245 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 ODAMA1E959 279 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 KRT87PA6NCN2 255 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CD300LBA8K4G0 201 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 TMEM250H0YL14 139 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 SGCEO43556 437 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 PDCD6O75340 191 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MPDU1O75352 247 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 NPYP01303 97 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 IFNW1P05000 195 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CTSDP07339 412 aaPredicted RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 HSP90AB1P08238 724 aaKnown RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CD82P27701 267 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 HLA-DMBP28068 263 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MDH1P40925 334 aaKnown RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CRYBB2P43320 205 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 STC1P52823 247 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 AIF1P55008 147 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 C21orf59P57076 290 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MLF1P58340 268 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 SCGB2A2Q13296 93 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MAPK14Q16539 360 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 FAM162BQ5T6X4 162 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms