RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PLA2G10O15496 165 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 TCF21O43680 179 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 ASAH1Q13510 395 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 EIF4EBP1Q13541 118 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-202ENST00000468040 ABCA11PQ4W5N1 156 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 MZT2BQ6NZ67 158 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 C16orf87Q6PH81 154 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 KCTD9Q7L273 389 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 PIFOQ8TCI5 191 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 MRGPRFQ96AM1 343 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 VPREB3Q9UKI3 123 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 C14orf166Q9Y224 244 aaKnown RBP12.22□□□□□ -0.45
SNIP1-202ENST00000468040 TCF19Q9Y242 345 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 PRELID3BQ9Y3B1 194 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 WASHC3Q9Y3C0 194 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 MTORP42345 2549 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 H7C2Y5 167 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 TNFSF12O43508 249 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 VENTXO95231 258 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 IGKV1D-33P01593 117 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 IGKV1-33P01594 117 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 CTSDP07339 412 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-202ENST00000468040 SNRNP70P08621 437 aaKnown RBP12.21□□□□□ -0.45
SNIP1-202ENST00000468040 RRASP10301 218 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 DEFA1P59665 94 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 DEFA3P59666 94 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 CBX3Q13185 183 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 HES1Q14469 280 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 RBMS2Q15434 407 aaKnown RBP12.21□□□□□ -0.45
SNIP1-202ENST00000468040 SLC9A3R2Q15599 337 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 RTL8BQ17RB0 113 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 PHLDA2Q53GA4 152 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 GLDNQ6ZMI3 551 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-202ENST00000468040 LIAT1Q6ZQX7 453 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 PDPNQ86YL7 162 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 LURAP1LQ8IV03 231 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 ZDHHC22Q8N966 263 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 OR2T10Q8NGZ9 312 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 TCTEX1D2Q8WW35 142 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 DDB2Q92466 427 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 SLC35D1Q9NTN3 355 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 TBC1D24Q9ULP9 559 aa12.21□□□□□ -0.45
SNIP1-202ENST00000468040 PGLYRP1O75594 196 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-202ENST00000468040 MOSP00540 346 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 CD24P25063 80 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 BTCP35070 178 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 KIR2DS2P43631 304 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 PIGPP57054 158 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 RND3P61587 244 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 IFITM3Q01628 133 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 EBI3Q14213 229 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 DHRS7BQ6IAN0 325 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-202ENST00000468040 POC5Q8NA72 575 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 PALMDQ9NP74 551 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 COPZ2Q9P299 210 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 GPR132Q9UNW8 380 aa12.2□□□□□ -0.46
SNIP1-202ENST00000468040 A6NDX4 124 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 LINC00473A8K010 186 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 NDUFB6O95139 128 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 RLN1P04808 185 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 TMEM11P17152 192 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 PI3P19957 117 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 CCR6P51684 374 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 LINC00205P59089 165 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 RPL30P62888 115 aaKnown RBP12.19□□□□□ -0.46
SNIP1-202ENST00000468040 C16orf82Q7Z2V1 217 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 OR4C13Q8NGP0 309 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 OR51H1Q8NH63 302 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 CD300LFQ8TDQ1 290 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 EAF1Q96JC9 268 aaPredicted RBP12.19□□□□□ -0.46
SNIP1-202ENST00000468040 GPHA2Q96T91 129 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 C5orf66Q9H5L9 145 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 RAB18Q9NP72 206 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 ESM1Q9NQ30 184 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 TNFRSF19Q9NS68 423 aa12.19□□□□□ -0.46
SNIP1-202ENST00000468040 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
SNIP1-202ENST00000468040 TEP1Q99973 2627 aaKnown RBP12.18□□□□□ -0.46
SNIP1-202ENST00000468040 MPPED1O15442 326 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 RBFOX2O43251 390 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNIP1-202ENST00000468040 FCGR3BO75015 233 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 RNASE1P07998 156 aaKnown RBP12.18□□□□□ -0.46
SNIP1-202ENST00000468040 F2RP25116 425 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 SLC6A1P30531 599 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 LY6EQ16553 131 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 TBC1D26Q86UD7 250 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 TCTEX1D1Q8N7M0 179 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 OR8H1Q8NGG4 311 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 OR4S2Q8NH73 311 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 FLYWCH2Q96CP2 140 aaKnown RBP12.18□□□□□ -0.46
SNIP1-202ENST00000468040 DUX5Q96PT3 197 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 RNF5Q99942 180 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 RTBDNQ9BSG5 229 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-202ENST00000468040 CHIAQ9BZP6 476 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 VSIG4Q9Y279 399 aa12.18□□□□□ -0.46
SNIP1-202ENST00000468040 MXRA5Q9NR99 2828 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 FAM240BA0A1B0GVZ2 78 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms