RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ZNF660Q6AZW8 331 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-207ENST00000467985 OR5M8Q8NGP6 311 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 OR10R2Q8NGX6 335 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 DYNC2LI1Q8TCX1 351 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 MYOZ3Q8TDC0 251 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 ACOT12Q8WYK0 555 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 UBE2E2Q96LR5 201 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 DUX3Q96PT4 197 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 WSB1Q9Y6I7 421 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 A6NHS1 94 aa14.9□□□□□ -0.02
COL7A1-207ENST00000467985 SCAND1P57086 179 aa14.9□□□□□ -0.02
COL7A1-207ENST00000467985 DCTN2Q13561 401 aaKnown RBP14.9□□□□□ -0.02
COL7A1-207ENST00000467985 DEFB136Q30KP8 78 aa14.9□□□□□ -0.02
COL7A1-207ENST00000467985 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.9□□□□□ -0.02
COL7A1-207ENST00000467985 TOLLIPQ9H0E2 274 aa14.9□□□□□ -0.02
COL7A1-207ENST00000467985 RDH8Q9NYR8 311 aa14.9□□□□□ -0.02
COL7A1-207ENST00000467985 COMMD3Q9UBI1 195 aa14.9□□□□□ -0.02
COL7A1-207ENST00000467985 IGKV1-6A0A0C4DH72 117 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 G3V318 75 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 FABP7O15540 132 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 FCGR3AP08637 254 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 CRIP2P52943 208 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-207ENST00000467985 PLA2G7Q13093 441 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 ARL6IP1Q15041 203 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 GLDNQ6ZMI3 551 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-207ENST00000467985 TCTEX1D1Q8N7M0 179 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 SAMD12Q8N8I0 201 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 MINDY2Q8NBR6 621 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 OR10J5Q8NHC4 309 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 ATG5Q9H1Y0 275 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 FBXL15Q9H469 300 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 RNF150Q9ULK6 438 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 SPATA2Q9UM82 520 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 VSIG4Q9Y279 399 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 KCNK7Q9Y2U2 307 aa14.89□□□□□ -0.03
COL7A1-207ENST00000467985 WI2-2373I1.2A0A1W2PRP0 233 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 RGS5O15539 181 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 SPDEFO95238 335 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 APOA2P02652 100 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 HIST1H1DP16402 221 aaKnown RBP14.88□□□□□ -0.03
COL7A1-207ENST00000467985 RUNX1Q01196 453 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 TMEM267Q0VDI3 215 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-207ENST00000467985 FHL3Q13643 280 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 DEFB121Q5J5C9 76 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 PDPNQ86YL7 162 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 ZNF491Q8N8L2 437 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 OR5H6Q8NGV6 325 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 TSNAXQ99598 290 aaKnown RBP14.88□□□□□ -0.03
COL7A1-207ENST00000467985 CABLES2Q9BTV7 478 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 C6orf62Q9GZU0 229 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-207ENST00000467985 RHBDL2Q9NX52 303 aa14.88□□□□□ -0.03
COL7A1-207ENST00000467985 RAB27BO00194 218 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 MFNGO00587 321 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 BET1O15155 118 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 GNB3P16520 340 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 TALDO1P37837 337 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 RAB9AP51151 201 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 CX3CL1P78423 397 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 DGCR2P98153 550 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 SRSF7Q16629 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL7A1-207ENST00000467985 MOGAT2Q3SYC2 334 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 UBE2NLQ5JXB2 153 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 C9orf66Q5T8R8 295 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 DRAXINQ8NBI3 349 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-207ENST00000467985 MCFD2Q8NI22 146 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 KLK15Q9H2R5 256 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 GAB2Q9UQC2 676 aa14.87□□□□□ -0.03
COL7A1-207ENST00000467985 FOXA2Q9Y261 457 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-207ENST00000467985 A0A075B6Q4 140 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 TRBV6-7A0A0A0MS04 114 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 FAM25AB3EWG3 89 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 FAM25CB3EWG5 89 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 FAM25GB3EWG6 89 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 I3L521 148 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 RAMP3O60896 148 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 PROP1O75360 226 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 SCGNO76038 276 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 OR8U8P0C7N1 319 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 ARFRP1Q13795 201 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 KIAA0141Q14154 515 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-207ENST00000467985 PYHIN1Q6K0P9 492 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 ZNF562Q6V9R5 426 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 Q6ZS49 121 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 ZNF383Q8NA42 475 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 OR11H1Q8NG94 326 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 ABHD5Q8WTS1 349 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 METTL1Q9UBP6 276 aaKnown RBP14.86□□□□□ -0.03
COL7A1-207ENST00000467985 ADAM30Q9UKF2 790 aa14.86□□□□□ -0.03
COL7A1-207ENST00000467985 M0R1X1 148 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 IGKV1-16P04430 117 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 GSTT2P0CG29 244 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 GSTT2BP0CG30 244 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 RPS16P62249 146 aaKnown RBP14.85□□□□□ -0.03
COL7A1-207ENST00000467985 NDPQ00604 133 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 TAGLNQ01995 201 aaKnown RBP14.85□□□□□ -0.03
COL7A1-207ENST00000467985 PSG5Q15238 335 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 ECSCRQ19T08 205 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 AKIRIN2Q53H80 203 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 C19orf54Q5BKX5 351 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 IGSF11Q5DX21 431 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms