RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ZFP36P26651 326 aaKnown RBP5.66□□□□□ -1.5
SCAF4-204ENST00000467731 GLP1RP43220 463 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 OR52W1Q6IF63 320 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 FAHD2BQ6P2I3 314 aaPredicted RBP5.66□□□□□ -1.5
SCAF4-204ENST00000467731 ZNF880Q6PDB4 577 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 TCF23Q7RTU1 214 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 C15orf54Q8N8G6 183 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 MAPK1IP1LQ8NDC0 245 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 FAHD2AQ96GK7 314 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 PACRGQ96M98 296 aaPredicted RBP5.66□□□□□ -1.5
SCAF4-204ENST00000467731 PRO1933Q9H354 126 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 Q9N2K0 584 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 MBNL3Q9NUK0 354 aaKnown RBP5.66□□□□□ -1.5
SCAF4-204ENST00000467731 TRBV6-6A0A0A6YYG2 114 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 A0A1W2PPE3 182 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 C7orf66A4D0T2 115 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 FAM157AC9JC47 383 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 M0R143 59 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 EREGO14944 169 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 PSMB6P28072 239 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 SSTR5P35346 364 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 CEBPGP53567 150 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 LCN2P80188 198 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 SCGB2B2Q4G0G5 96 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 BEST4Q8NFU0 473 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 UBALD1Q8TB05 177 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 SLC25A32Q9H2D1 315 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 GAR1Q9NY12 217 aaKnown RBP5.66□□□□□ -1.5
SCAF4-204ENST00000467731 OR6C3Q9NZP0 311 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 RPUSD1Q9UJJ7 312 aaKnown RBP5.66□□□□□ -1.5
SCAF4-204ENST00000467731 LINC00312Q9Y6C7 94 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 TRGV10A0A0A0MS01 117 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 hADV38S2A0JD32 116 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 TMEM218A2RU14 115 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 KIAA1324LA8MWY0 1029 aaPredicted RBP5.65□□□□□ -1.5
SCAF4-204ENST00000467731 TRDCB7Z8K6 153 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 K7EP13 123 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 SIX6O95475 246 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 HOXB5P09067 269 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 HOXA5P20719 270 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 CDX1P47902 265 aaPredicted RBP5.65□□□□□ -1.5
SCAF4-204ENST00000467731 ARSJQ5FYB0 599 aaPredicted RBP5.65□□□□□ -1.5
SCAF4-204ENST00000467731 TRIQKQ629K1 86 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 TMEM200BQ69YZ2 307 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 CDPF1Q6NVV7 123 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 ALKAL2Q6UX46 152 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 GLCCI1Q86VQ1 547 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 HOGA1Q86XE5 327 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 TAF9BQ9HBM6 251 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 ZNF286AQ9HBT8 521 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 LPAR2Q9HBW0 351 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 ANAPC10Q9UM13 185 aa5.65□□□□□ -1.5
SCAF4-204ENST00000467731 PPIAL4CA0A0B4J2A2 164 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 C5orf51A6NDU8 294 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 CBY3A6NI87 242 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 C12orf77C9JDV5 145 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 GGCTO75223 188 aaKnown RBP5.65□□□□□ -1.51
SCAF4-204ENST00000467731 SCTP09683 121 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 PPIAL4GP0DN37 164 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 CCL3L1P16619 93 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 OMGP23515 440 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 SSBP1Q04837 148 aaKnown RBP5.65□□□□□ -1.51
SCAF4-204ENST00000467731 MEF2CQ06413 473 aaPredicted RBP5.65□□□□□ -1.51
SCAF4-204ENST00000467731 LEMD1Q68G75 181 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 MOB1BQ7L9L4 216 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 FOXRED2Q8IWF2 684 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 RFESDQ8TAC1 157 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 ANXA10Q9UJ72 324 aa5.65□□□□□ -1.51
SCAF4-204ENST00000467731 LOC105371242A0A075B767 164 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 TEX13DA0A0J9YY54 714 aaPredicted RBP5.64□□□□□ -1.51
SCAF4-204ENST00000467731 CCSO14618 274 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 TCF21O43680 179 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 CD3DP04234 171 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 HRH1P35367 487 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 ERVFRD-1P60508 538 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 HLA-DRB3P79483 266 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 DHODHQ02127 395 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 LOXL1Q08397 574 aaPredicted RBP5.64□□□□□ -1.51
SCAF4-204ENST00000467731 SRSF7Q16629 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
SCAF4-204ENST00000467731 CR1LQ2VPA4 569 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 C10orf91Q5T1B1 145 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 ZNF57Q68EA5 555 aaPredicted RBP5.64□□□□□ -1.51
SCAF4-204ENST00000467731 FAAP20Q6NZ36 180 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 Q6ZS49 121 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 THNSL2Q86YJ6 484 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 TOMM5Q8N4H5 51 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 C8orf46Q8TAG6 207 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 IL1F10Q8WWZ1 152 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 ARL11Q969Q4 196 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 KIRREL1Q96J84 757 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 ZNF714Q96N38 554 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 SNHG12Q9BXW3 62 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 MFFQ9GZY8 342 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 MMP26Q9NRE1 261 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 CARHSP1Q9Y2V2 147 aaKnown RBP5.64□□□□□ -1.51
SCAF4-204ENST00000467731 KIR2DS1A0A191URI9 304 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 ANKRD20A5PA0PJZ0 165 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 ZNF736B4DX44 427 aaPredicted RBP5.64□□□□□ -1.51
SCAF4-204ENST00000467731 C15orf65H3BRN8 121 aa5.64□□□□□ -1.51
SCAF4-204ENST00000467731 FOXH1O75593 365 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms