RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TAS2R45P59539 299 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 BTN3A2P78410 334 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 CCL7P80098 99 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 AESQ08117 197 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 DEFB134Q4QY38 66 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 SPOPLQ6IQ16 392 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 SDIM1Q6ZPB5 146 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 HIST2H3AQ71DI3 136 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 BAP18Q8IXM2 172 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 LRRC34Q8IZ02 419 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 C1orf158Q8N1D5 194 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 OR10P1Q8NGE3 313 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 DIRAS2Q96HU8 199 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 SMDT1Q9H4I9 107 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 C11orf1Q9H5F2 150 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 PSTPIP2Q9H939 334 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 SLC2A9Q9NRM0 540 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 FKBP14Q9NWM8 211 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 ZNF337Q9Y3M9 751 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 TGIF2-C20orf24A0A0A6YYL0 155 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 DHRS12A0PJE2 317 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 OR6C6A6NF89 314 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 TMEM114B3SHH9 223 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 TRAPPC3O43617 180 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 KRT75O95678 551 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 TNNC2P02585 160 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 CD5P06127 495 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 OR5G3P0C626 314 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 RNASE2P10153 161 aaKnown RBP2.17□□□□□ -2.06
SMC4-208ENST00000467468 ESDP10768 282 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 ZNF22P17026 224 aaPredicted RBP2.17□□□□□ -2.06
SMC4-208ENST00000467468 ALOX5APP20292 161 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 CCL1P22362 96 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 NPPCP23582 126 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 IDH3GP51553 393 aaPredicted RBP2.17□□□□□ -2.06
SMC4-208ENST00000467468 PRDX4Q13162 271 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 NOXRED1Q6NXP6 359 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 TMEM86BQ8N661 226 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 IGF2BP2-AS1Q96M15 143 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 PRAP1Q96NZ9 151 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 OR8B2Q96RD0 313 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 PAIP2Q9BPZ3 127 aaKnown RBP2.17□□□□□ -2.06
SMC4-208ENST00000467468 TM2D3Q9BRN9 247 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 HIGD2AQ9BW72 106 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 VPS29Q9UBQ0 182 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 NUP205Q92621 2012 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 ATAD5Q96QE3 1844 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 PTPRJQ12913 1337 aa2.17□□□□□ -2.06
SMC4-208ENST00000467468 ADAMTSL1Q8N6G6 1762 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 LOC102725191A0A1B0GVB3 256 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 IFNA6P05013 189 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 HLA-DQB2P05538 268 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 MAP2K4P45985 399 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 SPCS3P61009 180 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 ERVS71-1P61550 626 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 RANP62826 216 aaKnown RBP2.16□□□□□ -2.06
SMC4-208ENST00000467468 BAMBIQ13145 260 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 TMEM31Q5JXX7 168 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 RASL11AQ6T310 242 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 C5orf46Q6UWT4 87 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 ZNF664Q8N3J9 261 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 DEFB125Q8N687 156 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 OR2T27Q8NH04 317 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 FNDC9Q8TBE3 224 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 SLC35B4Q969S0 331 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.16□□□□□ -2.06
SMC4-208ENST00000467468 KLK5Q9Y337 293 aaPredicted RBP2.16□□□□□ -2.06
SMC4-208ENST00000467468 KMT2EQ8IZD2 1858 aa2.16□□□□□ -2.06
SMC4-208ENST00000467468 COL18A1P39060 1754 aa2.15□□□□□ -2.06
SMC4-208ENST00000467468 CLDN24A6NM45 220 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 C17orf98A8MV24 154 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 SLC17A3O00476 420 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 SLC25A16P16260 332 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 CRYBB3P26998 211 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 REEP5Q00765 189 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 SRSF6Q13247 344 aaKnown RBP2.15□□□□□ -2.07
SMC4-208ENST00000467468 HTR4Q13639 388 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 PMAIP1Q13794 54 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 CST6Q15828 149 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 AKIRIN2Q53H80 203 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 FAM201AQ5SY85 155 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 HIST2H3PS2Q5TEC6 136 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 AMTNQ6UX39 209 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 ALKAL1Q6UXT8 129 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 LRRC25Q8N386 305 aaPredicted RBP2.15□□□□□ -2.07
SMC4-208ENST00000467468 CLDN22Q8N7P3 220 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 OR11H1Q8NG94 326 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 CMTM2Q8TAZ6 248 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 GPR119Q8TDV5 335 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 GNPNAT1Q96EK6 184 aaPredicted RBP2.15□□□□□ -2.07
SMC4-208ENST00000467468 CCL13Q99616 98 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 PKMYT1Q99640 499 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 PECRQ9BY49 303 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 ANAPC10Q9UM13 185 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 SNX12Q9UMY4 172 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 HEY1Q9Y5J3 304 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 PXMP4Q9Y6I8 212 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 ZFYVE9O95405 1425 aa2.15□□□□□ -2.07
SMC4-208ENST00000467468 IGKV1D-17A0A075B6S4 117 aa2.14□□□□□ -2.07
SMC4-208ENST00000467468 IGKV2-24A0A0C4DH68 120 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms