RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 OR2T27Q8NH04 317 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 FGF13Q92913 245 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 RNASE6Q93091 150 aaKnown RBP2.01□□□□□ -2.09
VPS13A-209ENST00000467124 NMNAT3Q96T66 252 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 UPK3BQ9BT76 320 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 C11orf1Q9H5F2 150 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 HRASLSQ9HDD0 168 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 C3orf18Q9UK00 162 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 HHLA2Q9UM44 414 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 NACADO15069 1562 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 CEP170Q5SW79 1584 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 ZSWIM8A7E2V4 1837 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 KIF15Q9NS87 1388 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 PTPRJQ12913 1337 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 IGHV3-73A0A0B4J1V6 119 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 G3V3Q6 166 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 KCNK1O00180 336 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 ZNF73O43830 326 aaPredicted RBP2□□□□□ -2.09
VPS13A-209ENST00000467124 ISG15P05161 165 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 IGHV3-30-3P0DP02 117 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 TAS2R45P59539 299 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 ZNF117Q03924 483 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 HCP5Q6MZN7 132 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 AMTNQ6UX39 209 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
VPS13A-209ENST00000467124 DCXRQ7Z4W1 244 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 SPATA12Q7Z6I5 190 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 RAB2BQ8WUD1 216 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 ITFG2Q969R8 447 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 HES4Q9HCC6 221 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 COQ4Q9Y3A0 265 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 MMACHCQ9Y4U1 282 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 ZNF407Q9C0G0 2248 aa2□□□□□ -2.09
VPS13A-209ENST00000467124 BRD4O60885 1362 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-209ENST00000467124 ATAD5Q96QE3 1844 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 DSCAML1Q8TD84 2053 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.99□□□□□ -2.09
VPS13A-209ENST00000467124 A0A0J9YX75 114 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 OR11H12B2RN74 326 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 ACOX3O15254 700 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 TRAPPC3O43617 180 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 AHSA1O95433 338 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 CCL3P10147 92 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 GZMHP20718 246 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 CCL1P22362 96 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 CRHBPP24387 322 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 ATP6V0CP27449 155 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 RWDD2BP57060 319 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 EBPQ15125 230 aaKnown RBP1.99□□□□□ -2.09
VPS13A-209ENST00000467124 LRRC75BQ2VPJ9 315 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 ACSM3Q53FZ2 586 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 CCDC122Q5T0U0 273 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 LPCAT4Q643R3 524 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 ZNF322Q6U7Q0 402 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-209ENST00000467124 SBSNQ6UWP8 590 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 C2orf91Q6ZV80 131 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 ZNF565Q8N9K5 539 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 OR2T4Q8NH00 348 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 OR11H2Q8NH07 326 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 GPR119Q8TDV5 335 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 ASB17Q8WXJ9 295 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 SFRP2Q96HF1 295 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 DIRAS2Q96HU8 199 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 SMDT1Q9H4I9 107 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 PXMP4Q9Y6I8 212 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 PLXNB1O43157 2135 aa1.99□□□□□ -2.09
VPS13A-209ENST00000467124 NOTCH2Q04721 2471 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 ADAMTSL1Q8N6G6 1762 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 MT-CO2P00403 227 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 CBR1P16152 277 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 NAA20P61599 178 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 HIST2H3PS2Q5TEC6 136 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 TMPPEQ6ZT21 453 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 UMODL1-AS1Q8N2C9 162 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 GPR32P1Q8NGA4 272 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 OR8K1Q8NGG5 319 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 FNDC9Q8TBE3 224 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 C16orf78Q8WTQ4 265 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 CCDC42Q96M95 316 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 TTTY13Q9BZ97 58 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 ANAPC10Q9UM13 185 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 KMT2EQ8IZD2 1858 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 CHD5Q8TDI0 1954 aa1.98□□□□□ -2.09
VPS13A-209ENST00000467124 DOCK6Q96HP0 2047 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 SLC17A3O00476 420 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 COX7A2LO14548 114 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 S100A6P06703 90 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 LGALS3P17931 250 aaKnown RBP1.97□□□□□ -2.09
VPS13A-209ENST00000467124 NPPCP23582 126 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 MAGOHP61326 146 aaKnown RBP1.97□□□□□ -2.09
VPS13A-209ENST00000467124 TNFRSF9Q07011 255 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 FAM78BQ5VT40 261 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 LGALS9CQ6DKI2 356 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 SFXN4Q6P4A7 337 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 CNEP1R1Q8N9A8 125 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 OR2D3Q8NGH3 330 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 KLK6Q92876 244 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 MS4A6EQ96DS6 147 aa1.97□□□□□ -2.09
VPS13A-209ENST00000467124 GNPNAT1Q96EK6 184 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-209ENST00000467124 C20orf166-AS1Q96NR2 134 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms