RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 CBX3Q13185 183 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 EIF4EBP1Q13541 118 aaPredicted RBP13.12□□□□□ -0.31
HLA-C-205ENST00000466892 SLC9A3R2Q15599 337 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 IDO2Q6ZQW0 420 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 ZNF818PQ6ZRF7 136 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 PDPNQ86YL7 162 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 TCTEX1D1Q8N7M0 179 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 CCL28Q9NRJ3 127 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 PRELID3BQ9Y3B1 194 aa13.12□□□□□ -0.31
HLA-C-205ENST00000466892 H0YJW9 148 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 TRIM77I1YAP6 450 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 M0QZK8 103 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 MOSP00540 346 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
HLA-C-205ENST00000466892 KIR2DS2P43631 304 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 RND3P61587 244 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
HLA-C-205ENST00000466892 FAAP20Q6NZ36 180 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 ZNF383Q8NA42 475 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 CD300LFQ8TDQ1 290 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 DDB2Q92466 427 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 C5orf30Q96GV9 206 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 FAM212BQ9NTI7 297 aaPredicted RBP13.11□□□□□ -0.31
HLA-C-205ENST00000466892 WASHC3Q9Y3C0 194 aa13.11□□□□□ -0.31
HLA-C-205ENST00000466892 A6NDX4 124 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 J3QRK9 145 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 RBFOX2O43251 390 aaKnown RBP eCLIP13.1□□□□□ -0.31
HLA-C-205ENST00000466892 B3GALNT1O75752 331 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 OR2F2O95006 317 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 CTSDP07339 412 aaPredicted RBP13.1□□□□□ -0.31
HLA-C-205ENST00000466892 SNRNP70P08621 437 aaKnown RBP13.1□□□□□ -0.31
HLA-C-205ENST00000466892 RTL8BQ17RB0 113 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 KCTD9Q7L273 389 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 ZDHHC22Q8N966 263 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 CAPSLQ8WWF8 208 aa13.1□□□□□ -0.31
HLA-C-205ENST00000466892 TEP1Q99973 2627 aaKnown RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 LYRM1O43325 122 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 PGAM2P15259 253 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 ASAH1Q13510 395 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 RBMS2Q15434 407 aaKnown RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 ABCA11PQ4W5N1 156 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 Q8N6K4 173 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 CCDC71LQ8N9Z2 235 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 POC5Q8NA72 575 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 OR4C13Q8NGP0 309 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 OR13C8Q8NGS7 320 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 MRGPRFQ96AM1 343 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 RBM14Q96PK6 669 aaKnown RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 PALMDQ9NP74 551 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 ESM1Q9NQ30 184 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 SLC2A9Q9NRM0 540 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 LIN7CQ9NUP9 197 aaKnown RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 C1RLQ9NZP8 487 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 GPR132Q9UNW8 380 aa13.09□□□□□ -0.31
HLA-C-205ENST00000466892 C14orf166Q9Y224 244 aaKnown RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 ANK3Q12955 4377 aaKnown RBP13.09□□□□□ -0.31
HLA-C-205ENST00000466892 PLA2G10O15496 165 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 PGLYRP1O75594 196 aaPredicted RBP13.08□□□□□ -0.32
HLA-C-205ENST00000466892 TMEM11P17152 192 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 PAX6P26367 422 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 DEFA1P59665 94 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 DEFA3P59666 94 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 HES1Q14469 280 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 MZT2BQ6NZ67 158 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 C16orf87Q6PH81 154 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 OR4S2Q8NH73 311 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 MARCH1Q8TCQ1 289 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 TCTEX1D2Q8WW35 142 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 FLYWCH2Q96CP2 140 aaKnown RBP13.08□□□□□ -0.32
HLA-C-205ENST00000466892 EAF1Q96JC9 268 aaPredicted RBP13.08□□□□□ -0.32
HLA-C-205ENST00000466892 AIFM2Q9BRQ8 373 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 CHIAQ9BZP6 476 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 SLC35D1Q9NTN3 355 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 COPZ2Q9P299 210 aa13.08□□□□□ -0.32
HLA-C-205ENST00000466892 LINC00473A8K010 186 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 H7C2Y5 167 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 FGF16O43320 207 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 SPDEFO95238 335 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 F2RP25116 425 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 LGALS7P47929 136 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 TMEM177Q53S58 311 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 OSR1Q8TAX0 266 aaPredicted RBP13.07□□□□□ -0.32
HLA-C-205ENST00000466892 MOB4Q9Y3A3 225 aa13.07□□□□□ -0.32
HLA-C-205ENST00000466892 IGHV3-72A0A0B4J1Y9 119 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 GPR137BO60478 399 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 NDUFB6O95139 128 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 RLN1P04808 185 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 SLC6A1P30531 599 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 PIGPP57054 158 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 C11orf88Q6PI97 169 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 GLDNQ6ZMI3 551 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-205ENST00000466892 NPBQ8NG41 125 aa13.06□□□□□ -0.32
HLA-C-205ENST00000466892 TSNAXQ99598 290 aaKnown RBP13.06□□□□□ -0.32
HLA-C-205ENST00000466892 SLC25A33Q9BSK2 321 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms