RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 CRYGBP07316 175 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 CD3GP09693 182 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 CLDN12P56749 244 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 SPHARQ15513 63 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 MRGPRG-AS1Q2M3A8 158 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 POC5Q8NA72 575 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 EDARADDQ8WWZ3 215 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 TSNAXQ99598 290 aaKnown RBP13.16□□□□□ -0.3
CYTH3-205ENST00000466543 RSRP1Q9BUV0 290 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 PECRQ9BY49 303 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 RIMS4Q9H426 269 aaPredicted RBP13.16□□□□□ -0.3
CYTH3-205ENST00000466543 STUB1Q9UNE7 303 aa13.16□□□□□ -0.3
CYTH3-205ENST00000466543 AK6Q9Y3D8 172 aaKnown RBP13.16□□□□□ -0.3
CYTH3-205ENST00000466543 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 SLC17A2O00624 439 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 VEGFCP49767 419 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 KLF5Q13887 457 aaPredicted RBP13.15□□□□□ -0.3
CYTH3-205ENST00000466543 IRF3Q14653 427 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 PDPNQ86YL7 162 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 C12orf4Q9NQ89 552 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 RDH8Q9NYR8 311 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 HSF4Q9ULV5 492 aa13.15□□□□□ -0.3
CYTH3-205ENST00000466543 A8MZ25 164 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 M0R1X1 148 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 CASQ2O14958 399 aaPredicted RBP13.14□□□□□ -0.31
CYTH3-205ENST00000466543 LDLRAD4O15165 306 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 ARSBP15848 533 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 RPS25P62851 125 aaKnown RBP13.14□□□□□ -0.31
CYTH3-205ENST00000466543 MED22Q15528 200 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 ANKRD13BQ86YJ7 626 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 THAP7Q9BT49 309 aaPredicted RBP13.14□□□□□ -0.31
CYTH3-205ENST00000466543 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
CYTH3-205ENST00000466543 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
CYTH3-205ENST00000466543 SRRM4A7MD48 611 aaKnown RBP13.13□□□□□ -0.31
CYTH3-205ENST00000466543 APELAP0DMC3 54 aa13.13□□□□□ -0.31
CYTH3-205ENST00000466543 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
CYTH3-205ENST00000466543 CMSS1Q9BQ75 279 aaKnown RBP13.13□□□□□ -0.31
CYTH3-205ENST00000466543 PLGRKTQ9HBL7 147 aa13.13□□□□□ -0.31
CYTH3-205ENST00000466543 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
CYTH3-205ENST00000466543 PALMDQ9NP74 551 aa13.13□□□□□ -0.31
CYTH3-205ENST00000466543 SLC35D1Q9NTN3 355 aa13.13□□□□□ -0.31
CYTH3-205ENST00000466543 C13orf42A0A1B0GVH6 325 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 TRDCB7Z8K6 153 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 APOA2P02652 100 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 ZP3P21754 424 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 CD40LGP29965 261 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 DYRK1AQ13627 763 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 MOGAT2Q3SYC2 334 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 IGSF11Q5DX21 431 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 SDHAF2Q9NX18 166 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
CYTH3-205ENST00000466543 H3BUA1 57 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 CNIH1O95406 144 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 TPBGQ13641 420 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 RAB11BQ15907 218 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 HAGHQ16775 308 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 ADAMTSL5Q6ZMM2 481 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 FAM3DQ96BQ1 224 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 OR2D2Q9H210 308 aa13.11□□□□□ -0.31
CYTH3-205ENST00000466543 FABP7O15540 132 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 CSN3P07498 182 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 GSTT2P0CG29 244 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 GSTT2BP0CG30 244 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 FABP5Q01469 135 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 ZNF343Q6P1L6 599 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 SGPP2Q8IWX5 399 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.1□□□□□ -0.31
CYTH3-205ENST00000466543 BVESQ8NE79 360 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 OR4A4PQ8NGN8 299 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 MAFIPQ8WZ33 124 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 UFD1Q92890 307 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 HARBI1Q96MB7 349 aa13.1□□□□□ -0.31
CYTH3-205ENST00000466543 TINAGL1Q9GZM7 467 aaPredicted RBP13.1□□□□□ -0.31
CYTH3-205ENST00000466543 PLECQ15149 4684 aaKnown RBP13.1□□□□□ -0.31
CYTH3-205ENST00000466543 A0A0G2JLM5 398 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 TMEM272A0A1B0GTI8 110 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 BET1O15155 118 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 BRI3O95415 125 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 HSMCR30P0CW71 290 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 TMEM177Q53S58 311 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 ISOC1Q96CN7 298 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 CABLES2Q9BTV7 478 aa13.09□□□□□ -0.31
CYTH3-205ENST00000466543 ZNF230Q9UIE0 474 aaPredicted RBP13.09□□□□□ -0.31
CYTH3-205ENST00000466543 TRBV6-7A0A0A0MS04 114 aa13.08□□□□□ -0.32
CYTH3-205ENST00000466543 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.32
CYTH3-205ENST00000466543 FCGR3AP08637 254 aa13.08□□□□□ -0.32
CYTH3-205ENST00000466543 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.32
CYTH3-205ENST00000466543 LGALS7P47929 136 aa13.08□□□□□ -0.32
CYTH3-205ENST00000466543 MECP2P51608 486 aaKnown RBP13.08□□□□□ -0.32
CYTH3-205ENST00000466543 HES5Q5TA89 166 aa13.08□□□□□ -0.32
CYTH3-205ENST00000466543 IDO2Q6ZQW0 420 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms