RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 ABHD5Q8WTS1 349 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 USMG5Q96IX5 58 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 CYYR1Q96J86 154 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 CMSS1Q9BQ75 279 aaKnown RBP10.4□□□□□ -0.74
CHD3-207ENST00000466233 PARP12Q9H0J9 701 aaKnown RBP10.4□□□□□ -0.74
CHD3-207ENST00000466233 ACOT13Q9NPJ3 140 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 C19orf73Q9NVV2 129 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 RDH8Q9NYR8 311 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 OR1A1Q9P1Q5 309 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 C13orf42A0A1B0GVH6 325 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 H0Y980 276 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 CRYGBP07316 175 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 SSX1Q16384 188 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 FAM209BQ5JX69 171 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 LIPKQ5VXJ0 399 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 Q8N1Y9 231 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 FAM3DQ96BQ1 224 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 CABLES2Q9BTV7 478 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 PECRQ9BY49 303 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 RAB22AQ9UL26 194 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 A3GALT2U3KPV4 340 aa10.39□□□□□ -0.75
CHD3-207ENST00000466233 RYR3Q15413 4870 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 TRBV6-7A0A0A0MS04 114 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 IGKV1-6A0A0C4DH72 117 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 IGLV2-23P01705 113 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 LYL1P12980 280 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 MRPS15P82914 257 aaKnown RBP10.38□□□□□ -0.75
CHD3-207ENST00000466233 CBX3Q13185 183 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 TATDN3Q17R31 274 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 C2orf76Q3KRA6 126 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 PLAC9Q5JTB6 97 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 Q6ZS49 121 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 ANKRD13BQ86YJ7 626 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 SGPP2Q8IWX5 399 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 TEX45Q8NA69 505 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 GFI1Q99684 422 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 HDHD3Q9BSH5 251 aaPredicted RBP10.38□□□□□ -0.75
CHD3-207ENST00000466233 FAM103A1Q9BTL3 118 aaKnown RBP10.38□□□□□ -0.75
CHD3-207ENST00000466233 TINAGL1Q9GZM7 467 aaPredicted RBP10.38□□□□□ -0.75
CHD3-207ENST00000466233 SLC35D1Q9NTN3 355 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 V9GY05 133 aa10.38□□□□□ -0.75
CHD3-207ENST00000466233 TRIM64CA6NLI5 447 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 FABP7O15540 132 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 DENRO43583 198 aaKnown RBP10.37□□□□□ -0.75
CHD3-207ENST00000466233 SLC25A17O43808 307 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 CNIH1O95406 144 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 IGHV3-11P01762 117 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 VEGFCP49767 419 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
CHD3-207ENST00000466233 RTL8BQ17RB0 113 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 ZNF343Q6P1L6 599 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 PRSS48Q7RTY5 328 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 DRAXINQ8NBI3 349 aaPredicted RBP10.37□□□□□ -0.75
CHD3-207ENST00000466233 OR9G4Q8NGQ1 327 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 OR2K2Q8NGT1 345 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 OR10J5Q8NHC4 309 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 MS4A10Q96PG2 267 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 KCNK15Q9H427 330 aa10.37□□□□□ -0.75
CHD3-207ENST00000466233 AK6Q9Y3D8 172 aaKnown RBP10.37□□□□□ -0.75
CHD3-207ENST00000466233 TRAV1-2A0A0B4J238 106 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 M0R1X1 148 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 RGS10O43665 173 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 AIREO43918 545 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 CREBL2O60519 120 aaPredicted RBP10.36□□□□□ -0.75
CHD3-207ENST00000466233 OR2A4O95047 310 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 CD3GP09693 182 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 IGHV4-30-4P0DP06 118 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 RAB6AP20340 208 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 GALP22466 123 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 GADD45AP24522 165 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 OVCH2Q7RTZ1 564 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 GRPEL2Q8TAA5 225 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 CASTOR1Q8WTX7 329 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 TMEM203Q969S6 136 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 RAB3CQ96E17 227 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 CLCC1Q96S66 551 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 SDHAF2Q9NX18 166 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 PEF1Q9UBV8 284 aaKnown RBP10.36□□□□□ -0.75
CHD3-207ENST00000466233 KCNK7Q9Y2U2 307 aa10.36□□□□□ -0.75
CHD3-207ENST00000466233 PDCD5O14737 125 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 FCGR3AP08637 254 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 CALRP27797 417 aaKnown RBP10.35□□□□□ -0.75
CHD3-207ENST00000466233 UBE2KP61086 200 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 IL34Q6ZMJ4 242 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 LAX1Q8IWV1 398 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 Q8N402 240 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 OR10R2Q8NGX6 335 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 OSR1Q8TAX0 266 aaPredicted RBP10.35□□□□□ -0.75
CHD3-207ENST00000466233 HARBI1Q96MB7 349 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 MGLLQ99685 303 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 EDA2RQ9HAV5 297 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 ZNF355PQ9NSJ1 428 aa10.35□□□□□ -0.75
CHD3-207ENST00000466233 TMEM272A0A1B0GTI8 110 aa10.34□□□□□ -0.75
CHD3-207ENST00000466233 METTL21EPA6NDL7 271 aa10.34□□□□□ -0.75
CHD3-207ENST00000466233 FAM223BA6NKX1 122 aa10.34□□□□□ -0.75
CHD3-207ENST00000466233 RAB27BO00194 218 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms