RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 SDSLQ96GA7 329 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.67□□□□□ -0.22
SLX4-202ENST00000466154 POLEQ07864 2286 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 LOC102723971A0A1B0GUV8 181 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 SOX15O60248 233 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 FABP1P07148 127 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 BCL2P10415 239 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 OR10P1Q8NGE3 313 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 ASCL3Q9NQ33 180 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 LRRC30A6NM36 301 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 ZNF737O75373 536 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 SLC25A6P12236 298 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 ADIRFQ15847 76 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 RPL39P5Q59GN2 51 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 KLF2Q9Y5W3 355 aaPredicted RBP13.66□□□□□ -0.22
SLX4-202ENST00000466154 C5orf52A6NGY3 159 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 M0R1X1 148 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 IGKV1D-33P01593 117 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 IGKV1-33P01594 117 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 IFNA4P05014 189 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 CEACAM1P13688 526 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 AGAP20933 346 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 C21orf62-AS1Q17RA5 79 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 MSMPQ1L6U9 139 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 KHDC3LQ587J8 217 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 NCR3LG1Q68D85 454 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 SLC35E4Q6ICL7 350 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 STARD4Q96DR4 205 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 OR2V2Q96R30 315 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 PIGBOS1A0A0B4J2F0 54 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 J3QW42 95 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 FOLR2P14207 255 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 RNF212Q495C1 297 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 FFAR4Q5NUL3 377 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 ZNF709Q8N972 641 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 WASF3Q9UPY6 502 aa13.66□□□□□ -0.22
SLX4-202ENST00000466154 MARCH11A6NNE9 402 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 BRWD1-AS2P59051 145 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 TMEM41BQ5BJD5 291 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 RPP25LQ8N5L8 163 aaKnown RBP13.65□□□□□ -0.22
SLX4-202ENST00000466154 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 MUCL1Q96DR8 90 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 HINT2Q9BX68 163 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 EGLN1Q9GZT9 426 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 AQP7O14520 342 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 IFNA10P01566 189 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 PRAMEF5Q5TYX0 476 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 ACSM6Q6P461 480 aa13.65□□□□□ -0.22
SLX4-202ENST00000466154 QTRT1Q9BXR0 403 aaKnown RBP13.65□□□□□ -0.22
SLX4-202ENST00000466154 TNFSF13O75888 250 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 ZADH2Q8N4Q0 377 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 TUBA4BQ9H853 241 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 HES4Q9HCC6 221 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 OR10G4Q8NGN3 311 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 OR10G9Q8NGN4 311 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 OR10G7Q8NGN6 311 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 R3HDM4Q96D70 268 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 ZNF71Q9NQZ8 489 aaPredicted RBP13.64□□□□□ -0.23
SLX4-202ENST00000466154 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
SLX4-202ENST00000466154 A0A1B0GW64 132 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 LY86O95711 162 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 COX5AP20674 150 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 UBE2G2P60604 165 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 ELOBQ15370 118 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 UTF1Q5T230 341 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 HEPN1Q6WQI6 88 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 SSX3Q99909 188 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 SMIM7Q9BQ49 75 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 DKK4Q9UBT3 224 aa13.64□□□□□ -0.23
SLX4-202ENST00000466154 TPRP12270 2363 aaKnown RBP13.63□□□□□ -0.23
SLX4-202ENST00000466154 TRGC2P03986 189 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 OR8U8P0C7N1 319 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 SMDT1Q9H4I9 107 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 CRYAAP02489 173 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 GCSAMLQ5JQS6 135 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 FAM90A2PQ658T7 463 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 DUX4L9Q6RFH8 374 aaPredicted RBP13.63□□□□□ -0.23
SLX4-202ENST00000466154 OR4F5Q8NH21 305 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 OR4F4Q96R69 305 aa13.63□□□□□ -0.23
SLX4-202ENST00000466154 AP4M1O00189 453 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 ITLN1Q8WWA0 313 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 HEYLQ9NQ87 328 aaPredicted RBP13.62□□□□□ -0.23
SLX4-202ENST00000466154 HSPB7Q9UBY9 170 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 ANKRD11Q6UB99 2663 aaPredicted RBP13.62□□□□□ -0.23
SLX4-202ENST00000466154 IGKV1D-17A0A075B6S4 117 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 OPN1MWP04001 364 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 OR9G9P0C7N8 305 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 OPN1MW2P0DN77 364 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 OPN1MW3P0DN78 364 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 GNG10P50151 68 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 PLSCR4Q9NRQ2 329 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 IFNA1P01562 189 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 PAX6P26367 422 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 SERF2P84101 59 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 TMEM14EPQ6UXP3 125 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 DPPA3Q6W0C5 159 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 OR4A16Q8NH70 328 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 TMEM204Q9BSN7 226 aa13.62□□□□□ -0.23
SLX4-202ENST00000466154 KALRNO60229 2985 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms