RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 KIAA1456Q9P272 454 aa20.39■□□□□ 0.85
SMC4-206ENST00000465903 IGHV7-81A0A0B4J1V7 117 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 LINC00473A8K010 186 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 APOA2P02652 100 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 THBS3P49746 956 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 LIN54Q6MZP7 749 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 ZNF645Q8N7E2 425 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 OR5AP2Q8NGF4 316 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 DDB2Q92466 427 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 NECAP2Q9NVZ3 263 aa20.38■□□□□ 0.85
SMC4-206ENST00000465903 MRPS7Q9Y2R9 242 aaKnown RBP20.38■□□□□ 0.85
SMC4-206ENST00000465903 SMIM31A0A1B0GVY4 71 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 TCRBV4S1A1TA0A5B7 111 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 IGF1P05019 195 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 NAT1P18440 290 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 FCGR2CP31995 323 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 RPS16P62249 146 aaKnown RBP20.37■□□□□ 0.85
SMC4-206ENST00000465903 PSG5Q15238 335 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 BVESQ8NE79 360 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 GPX8Q8TED1 209 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 FLYWCH2Q96CP2 140 aaKnown RBP20.37■□□□□ 0.85
SMC4-206ENST00000465903 IFT46Q9NQC8 304 aa20.37■□□□□ 0.85
SMC4-206ENST00000465903 FCN1O00602 326 aa20.36■□□□□ 0.85
SMC4-206ENST00000465903 OR5H8P0DN80 308 aa20.36■□□□□ 0.85
SMC4-206ENST00000465903 DYNC2LI1Q8TCX1 351 aa20.36■□□□□ 0.85
SMC4-206ENST00000465903 MIXL1Q9H2W2 232 aa20.36■□□□□ 0.85
SMC4-206ENST00000465903 OR51J1Q9H342 316 aa20.36■□□□□ 0.85
SMC4-206ENST00000465903 RBMX2Q9Y388 322 aaKnown RBP20.36■□□□□ 0.85
SMC4-206ENST00000465903 TNCP24821 2201 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 FAM25AB3EWG3 89 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 FAM25CB3EWG5 89 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 FAM25GB3EWG6 89 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 IGLV2-23P01705 113 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 AADACP22760 399 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 TAGLNQ01995 201 aaKnown RBP20.35■□□□□ 0.85
SMC4-206ENST00000465903 CFHR3Q02985 330 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 EIF4EBP1Q13541 118 aaPredicted RBP20.35■□□□□ 0.85
SMC4-206ENST00000465903 CDK10Q15131 360 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 LYSMD2Q8IV50 215 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 GIMAP1Q8WWP7 306 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 ADTRPQ96IZ2 230 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 TSNAXQ99598 290 aaKnown RBP20.35■□□□□ 0.85
SMC4-206ENST00000465903 SCOCQ9UIL1 159 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 ZNF580Q9UK33 172 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 TSSC4Q9Y5U2 329 aaPredicted RBP20.35■□□□□ 0.85
SMC4-206ENST00000465903 CEPT1Q9Y6K0 416 aa20.35■□□□□ 0.85
SMC4-206ENST00000465903 A0A1W2PRX2 142 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 SLC22A5O76082 557 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 OPN1MWP04001 364 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 OPN1MW2P0DN77 364 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 OPN1MW3P0DN78 364 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 RPL30P62888 115 aaKnown RBP20.34■□□□□ 0.85
SMC4-206ENST00000465903 SLC35B1P78383 322 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 TMEM177Q53S58 311 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 SNX29P2Q8IUI4 249 aa20.34■□□□□ 0.85
SMC4-206ENST00000465903 METTL1Q9UBP6 276 aaKnown RBP20.34■□□□□ 0.85
SMC4-206ENST00000465903 H3BMQ9 156 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 CTDSP2O14595 271 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 ATP6V0E1O15342 81 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 SPDEFO95238 335 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 PPYP01298 95 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 NDPQ00604 133 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 OVCH2Q7RTZ1 564 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 COMMD1Q8N668 190 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 ISOC1Q96CN7 298 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 R3HDM4Q96D70 268 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 GON7Q9BXV9 100 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 SCPEP1Q9HB40 452 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 CCL28Q9NRJ3 127 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 ADAM30Q9UKF2 790 aa20.33■□□□□ 0.85
SMC4-206ENST00000465903 SRRM4A7MD48 611 aaKnown RBP20.32■□□□□ 0.84
SMC4-206ENST00000465903 CRYGBP07316 175 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 RRASP10301 218 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 RFX2P48378 723 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 CX3CL1P78423 397 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 ZNF660Q6AZW8 331 aaPredicted RBP20.32■□□□□ 0.84
SMC4-206ENST00000465903 CLCC1Q96S66 551 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 TPSG1Q9NRR2 321 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 EXTL2Q9UBQ6 330 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 FBXO7Q9Y3I1 522 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 WSB1Q9Y6I7 421 aa20.32■□□□□ 0.84
SMC4-206ENST00000465903 G3V318 75 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 SULT1C2O00338 296 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 SLC25A17O43808 307 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 PMP2P02689 132 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 PPIFP30405 207 aaKnown RBP20.31■□□□□ 0.84
SMC4-206ENST00000465903 LGALS7P47929 136 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 DYRK1AQ13627 763 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 PLGLAQ15195 96 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 DHRS11Q6UWP2 260 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 EHFQ9NZC4 300 aa20.31■□□□□ 0.84
SMC4-206ENST00000465903 CCDC59Q9P031 241 aaKnown RBP20.31■□□□□ 0.84
SMC4-206ENST00000465903 EGR2P11161 476 aaPredicted RBP20.3■□□□□ 0.84
SMC4-206ENST00000465903 VDAC1P21796 283 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 RPL23AP62750 156 aaKnown RBP20.3■□□□□ 0.84
SMC4-206ENST00000465903 RTL8BQ17RB0 113 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 TEX38Q6PEX7 206 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 OR4F17Q8NGA8 305 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 SECTM1Q8WVN6 248 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 HARBI1Q96MB7 349 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms