RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 FXYD4P59646 89 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 LSAMPQ13449 338 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 SURF2Q15527 256 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-209ENST00000465132 LIAT1Q6ZQX7 453 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 C5orf24Q7Z6I8 188 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 SLC38A6Q8IZM9 456 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 ZFAND1Q8TCF1 268 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 SECTM1Q8WVN6 248 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 ST6GALNAC6Q969X2 333 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF486Q96H40 463 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-209ENST00000465132 HSD17B10Q99714 261 aaKnown RBP14.03□□□□□ -0.16
CPSF4-209ENST00000465132 SLC5A7Q9GZV3 580 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 RAB18Q9NP72 206 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 RNF150Q9ULK6 438 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 APOA2P02652 100 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 RRASP10301 218 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 THBS3P49746 956 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 RAB13P51153 203 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 KLF9Q13886 244 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-209ENST00000465132 SCGB2B2Q4G0G5 96 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 ZNF660Q6AZW8 331 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-209ENST00000465132 C11orf88Q6PI97 169 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 MOB3BQ86TA1 216 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 THNSL2Q86YJ6 484 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 OR4C16Q8NGL9 310 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 CAPSLQ8WWF8 208 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 ABHD14BQ96IU4 210 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 TINAGL1Q9GZM7 467 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-209ENST00000465132 SLC2A8Q9NY64 477 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 PRELID3BQ9Y3B1 194 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 NOTCH1P46531 2555 aa14.02□□□□□ -0.17
CPSF4-209ENST00000465132 PRKDCP78527 4128 aaKnown RBP14.01□□□□□ -0.17
CPSF4-209ENST00000465132 IGHV1-3A0A0C4DH29 117 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 OR5H14A6NHG9 310 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 CD1BP29016 333 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 DEFA1P59665 94 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 DEFA3P59666 94 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 CATR1Q13166 79 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 BAK1Q16611 211 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 ABCA11PQ4W5N1 156 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 ZNF66Q6ZN08 573 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 SSX3Q99909 188 aa14.01□□□□□ -0.17
CPSF4-209ENST00000465132 SLC25A21Q9BQT8 299 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-209ENST00000465132 M0R1X1 148 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 GPR31O00270 319 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 PGAM2P15259 253 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 RTL8BQ17RB0 113 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 UTF1Q5T230 341 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 FAM53AQ6NSI3 398 aaPredicted RBP14□□□□□ -0.17
CPSF4-209ENST00000465132 MZT2BQ6NZ67 158 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 Q6ZSV7 163 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 ODF3L1Q8IXM7 274 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 TCTEX1D1Q8N7M0 179 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 POC5Q8NA72 575 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 OR56B4Q8NH76 319 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 PARP12Q9H0J9 701 aaKnown RBP14□□□□□ -0.17
CPSF4-209ENST00000465132 HRASLSQ9HDD0 168 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 SDHAF2Q9NX18 166 aa14□□□□□ -0.17
CPSF4-209ENST00000465132 C14orf166Q9Y224 244 aaKnown RBP14□□□□□ -0.17
CPSF4-209ENST00000465132 J3QRK9 145 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 KIR2DS2P43631 304 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 IDO2Q6ZQW0 420 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 C16orf82Q7Z2V1 217 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 CCDC71LQ8N9Z2 235 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 OR8H1Q8NGG4 311 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 OR51S1Q8NGJ8 323 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 OR2T10Q8NGZ9 312 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 AJUBAQ96IF1 538 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 RNF5Q99942 180 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 AIFM2Q9BRQ8 373 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 C16orf95Q9H693 158 aa13.99□□□□□ -0.17
CPSF4-209ENST00000465132 PIGBOS1A0A0B4J2F0 54 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 A0A1W2PPI3 338 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 H3BUX3 64 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 M0QZK8 103 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 B3GALNT1O75752 331 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 UPK1BO75841 260 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 TSPAN15O95858 294 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 REG1BP48304 166 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 HABP2Q14520 560 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-209ENST00000465132 RPL39P5Q59GN2 51 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 DHRS7BQ6IAN0 325 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-209ENST00000465132 LHFPL1Q86WI0 220 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 PDPNQ86YL7 162 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 DRAM1Q8N682 238 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 BVESQ8NE79 360 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 CD300LFQ8TDQ1 290 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 SDHCQ99643 169 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-209ENST00000465132 RSRP1Q9BUV0 290 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 VPREB3Q9UKI3 123 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 WASHC3Q9Y3C0 194 aa13.98□□□□□ -0.17
CPSF4-209ENST00000465132 IGKV1D-13A0A0B4J2D9 117 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 H7C2Y5 167 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 MOSP00540 346 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 IGKV1-13P0DP09 117 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 HES1Q14469 280 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 AADACL3Q5VUY0 350 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 KCTD9Q7L273 389 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 OR4D10Q8NGI6 311 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 OR5AN1Q8NGI8 311 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms