RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 MRPS15P82914 257 aaKnown RBP11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 TAGLNQ01995 201 aaKnown RBP11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 ARPC1AQ92747 370 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 RAB3CQ96E17 227 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 RHOVQ96L33 236 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 CABLES2Q9BTV7 478 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 CENPOQ9BU64 300 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 ALX4Q9H161 411 aaPredicted RBP11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 IGHV4OR15-8A0A075B7B6 117 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 A0A087WW49 117 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 H3BUA1 57 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 M0R1X1 148 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 SAP30O75446 220 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 LY86O95711 162 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 OR8U9P0C7N5 309 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 SLURP1P55000 103 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 HES5Q5TA89 166 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 ACSM6Q6P461 480 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 ZNF367Q7RTV3 350 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 CASTOR1Q8WTX7 329 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 FAM103A1Q9BTL3 118 aaKnown RBP11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 SLC35D1Q9NTN3 355 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 BLOC1S6Q9UL45 172 aa11.08□□□□□ -0.64
SNRNP40-203ENST00000463988 TRBV6-7A0A0A0MS04 114 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 IFITM5A6NNB3 132 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 SLC25A17O43808 307 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 FCGR3AP08637 254 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 RAB6AP20340 208 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 GALP22466 123 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 GADD45AP24522 165 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 LINC00205P59089 165 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 TPPP2P59282 170 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 PLA2G7Q13093 441 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 FXYD3Q14802 87 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 SSX1Q16384 188 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 Q6ZS49 121 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 OR6Q1Q8NGQ2 317 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 OR10R2Q8NGX6 335 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 OR10J5Q8NHC4 309 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 TMEM68Q96MH6 324 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 MS4A10Q96PG2 267 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 NDUFB11Q9NX14 153 aa11.07□□□□□ -0.64
SNRNP40-203ENST00000463988 TRDV1A0A1B0GX56 115 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 RAB27BO00194 218 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 MFNGO00587 321 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 BET1O15155 118 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 BRI3O95415 125 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 TRGV3P03979 118 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 CRYGBP07316 175 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 GSTT2P0CG29 244 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 GSTT2BP0CG30 244 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 HIST1H1DP16402 221 aaKnown RBP11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 MOGAT2Q3SYC2 334 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 IGSF11Q5DX21 431 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 POC5Q8NA72 575 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 GRPEL2Q8TAA5 225 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 ASCL2Q99929 193 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 OR2D2Q9H210 308 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 SDHAF2Q9NX18 166 aa11.06□□□□□ -0.64
SNRNP40-203ENST00000463988 A0A0G2JLM5 398 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 METTL21EPA6NDL7 271 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 CNIH1O95406 144 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 RRASP10301 218 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 SNRPBP14678 240 aaKnown RBP11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 GP9P14770 177 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 SPNP16150 400 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 GNB3P16520 340 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 MYL9P24844 172 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 PITPNAQ00169 270 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 CBX3Q13185 183 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 ARL6IP1Q15041 203 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 RYR3Q15413 4870 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 TMEM177Q53S58 311 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 IZUMO2Q6UXV1 221 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 ADTRPQ96IZ2 230 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 OR4C12Q96R67 309 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 ELOVL1Q9BW60 279 aa11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 RANGRFQ9HD47 186 aaPredicted RBP11.05□□□□□ -0.64
SNRNP40-203ENST00000463988 C13orf42A0A1B0GVH6 325 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 SHISA3A0PJX4 238 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 MRPS14O60783 128 aaKnown RBP11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 RAB3BP20337 219 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 ZP3P21754 424 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 OR10A3P58181 314 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 RTL8BQ17RB0 113 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 CNBD2Q96M20 576 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 ZNF355PQ9NSJ1 428 aa11.04□□□□□ -0.64
SNRNP40-203ENST00000463988 C3orf84H3BNL1 204 aa11.03□□□□□ -0.64
SNRNP40-203ENST00000463988 DTYMKP23919 212 aa11.03□□□□□ -0.64
SNRNP40-203ENST00000463988 TALDO1P37837 337 aa11.03□□□□□ -0.64
SNRNP40-203ENST00000463988 PJVKQ0ZLH3 352 aa11.03□□□□□ -0.64
SNRNP40-203ENST00000463988 H1FOOQ8IZA3 346 aaPredicted RBP11.03□□□□□ -0.64
SNRNP40-203ENST00000463988 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms