RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SLC25A38Q96DW6 304 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 DIABLOQ9NR28 239 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 SLC35D1Q9NTN3 355 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 METTL1Q9UBP6 276 aaKnown RBP12.72□□□□□ -0.37
COL1A1-202ENST00000463440 SPATA2Q9UM82 520 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 WSB1Q9Y6I7 421 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 TRAV18A0A075B6X5 111 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 G3V318 75 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 IGKV1-16P04430 117 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 PSMB8P28062 276 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 LINC00205P59089 165 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 PSG5Q15238 335 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 CNIH2Q6PI25 160 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 REC114Q7Z4M0 266 aa12.71□□□□□ -0.37
COL1A1-202ENST00000463440 MRPL41Q8IXM3 137 aaKnown RBP12.71□□□□□ -0.37
COL1A1-202ENST00000463440 SSX5O60225 188 aa12.7□□□□□ -0.38
COL1A1-202ENST00000463440 PPIFP30405 207 aaKnown RBP12.7□□□□□ -0.38
COL1A1-202ENST00000463440 TGFBR1P36897 503 aa12.7□□□□□ -0.38
COL1A1-202ENST00000463440 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
COL1A1-202ENST00000463440 CX3CL1P78423 397 aa12.7□□□□□ -0.38
COL1A1-202ENST00000463440 TMEM267Q0VDI3 215 aaPredicted RBP12.7□□□□□ -0.38
COL1A1-202ENST00000463440 ABHD5Q8WTS1 349 aa12.7□□□□□ -0.38
COL1A1-202ENST00000463440 ADTRPQ96IZ2 230 aa12.7□□□□□ -0.38
COL1A1-202ENST00000463440 GPR61Q9BZJ8 451 aa12.7□□□□□ -0.38
COL1A1-202ENST00000463440 NECAP2Q9NVZ3 263 aa12.7□□□□□ -0.38
COL1A1-202ENST00000463440 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 CCL24O00175 119 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 FCN1O00602 326 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 RRASP10301 218 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 RPS19P39019 145 aaKnown RBP12.69□□□□□ -0.38
COL1A1-202ENST00000463440 LGALS7P47929 136 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 LUMP51884 338 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-202ENST00000463440 CRIP2P52943 208 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-202ENST00000463440 NDPQ00604 133 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 RTL8BQ17RB0 113 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 ECSCRQ19T08 205 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 FOXB2Q5VYV0 432 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 ZNF562Q6V9R5 426 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 TCTEX1D1Q8N7M0 179 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 RAX2Q96IS3 184 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 CLCC1Q96S66 551 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 P2RX4Q99571 388 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 MCRIP2Q9BUT9 160 aaKnown RBP12.69□□□□□ -0.38
COL1A1-202ENST00000463440 ANXA10Q9UJ72 324 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 OR2W1Q9Y3N9 320 aa12.69□□□□□ -0.38
COL1A1-202ENST00000463440 SLC25A17O43808 307 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 SLC22A5O76082 557 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 IGLV1-40P01703 118 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 PRB2P02812 416 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-202ENST00000463440 NFYAP23511 347 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-202ENST00000463440 MINDY2Q8NBR6 621 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 BVESQ8NE79 360 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 C4orf3Q8WVX3 66 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 S100A16Q96FQ6 103 aaKnown RBP12.68□□□□□ -0.38
COL1A1-202ENST00000463440 C5orf30Q96GV9 206 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 HARBI1Q96MB7 349 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 DUX3Q96PT4 197 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 AUNIPQ9H7T9 357 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 FOXA2Q9Y261 457 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-202ENST00000463440 FBXO7Q9Y3I1 522 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 A3GALT2U3KPV4 340 aa12.68□□□□□ -0.38
COL1A1-202ENST00000463440 A0A1W2PN81 502 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 J3QRK9 145 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 SHOXO15266 292 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 CA2P00918 260 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 HLA-DQB1P01920 261 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
COL1A1-202ENST00000463440 CHRNA7P36544 502 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 RAB25P57735 213 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 ARPC4P59998 168 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 TMEM177Q53S58 311 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 UBE2NLQ5JXB2 153 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 PPP1R27Q86WC6 154 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 ZNF645Q8N7E2 425 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 BEST4Q8NFU0 473 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 MYOZ3Q8TDC0 251 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 DPF1Q92782 380 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 UBE2E2Q96LR5 201 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 KLK15Q9H2R5 256 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 VSIG4Q9Y279 399 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 NUBP2Q9Y5Y2 271 aa12.67□□□□□ -0.38
COL1A1-202ENST00000463440 XRCC3O43542 346 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 EGR2P11161 476 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-202ENST00000463440 CBX5P45973 191 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 RAB9AP51151 201 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 DEFB136Q30KP8 78 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 AKIRIN2Q53H80 203 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 C19orf54Q5BKX5 351 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 HOGA1Q86XE5 327 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 SAMD12Q8N8I0 201 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 ZNF491Q8N8L2 437 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 ARPC1AQ92747 370 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 SLC25A46Q96AG3 418 aa12.66□□□□□ -0.38
COL1A1-202ENST00000463440 CNIH1O95406 144 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 CD40LGP29965 261 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 FXYD3Q14802 87 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 ACTBL2Q562R1 376 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms