RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 A0A1B0GVG6 124 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 TMEM210A6NLX4 147 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 H3BSA7 217 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 M0R381 172 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 RBBP9O75884 186 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 IGLV3-27P01718 113 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 GYPCP04921 128 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 IL3P08700 152 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 OR4A8P0C604 315 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 INAFM2P0DMQ5 153 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 MLNP12872 115 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 CDK2P24941 298 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 S100A5P33763 92 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 CTBP2P56545 445 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 KLF3P57682 345 aaPredicted RBP2.24□□□□□ -2.05
USH2A-203ENST00000463147 NAA20P61599 178 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 RANP62826 216 aaKnown RBP2.24□□□□□ -2.05
USH2A-203ENST00000463147 HLA-DRB3P79483 266 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 DNLZQ5SXM8 178 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 CLVS2Q5SYC1 327 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 C10orf91Q5T1B1 145 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 WDR59Q6PJI9 974 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 GID4Q8IVV7 300 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 ASB17Q8WXJ9 295 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 STACQ99469 402 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 EBNA1BP2Q99848 306 aaKnown RBP2.24□□□□□ -2.05
USH2A-203ENST00000463147 MED18Q9BUE0 208 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 SCRT1Q9BWW7 348 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 OR51B6Q9H340 312 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 SLC23A2Q9UGH3 650 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 POLR1DQ9Y2S0 133 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 SUPT6HQ7KZ85 1726 aaKnown RBP2.24□□□□□ -2.05
USH2A-203ENST00000463147 DENND4BO75064 1496 aaPredicted RBP2.24□□□□□ -2.05
USH2A-203ENST00000463147 MYOM2P54296 1465 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 FAM135BQ49AJ0 1406 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 SSH2Q76I76 1423 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 CASKIN1Q8WXD9 1431 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 DSCAML1Q8TD84 2053 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 PCF11O94913 1555 aaKnown RBP2.23□□□□□ -2.05
USH2A-203ENST00000463147 COL18A1P39060 1754 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 TTC21AQ8NDW8 1320 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 SHANK3Q9BYB0 1731 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 LCTP09848 1927 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 FANCD2Q9BXW9 1451 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 TMED7-TICAM2A0A0A6YYA0 188 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 M0R036 132 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 DEDDO75618 318 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 RPP14O95059 124 aaKnown RBP2.23□□□□□ -2.05
USH2A-203ENST00000463147 CCL1P22362 96 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 CCR7P32248 378 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 OR1E2P47887 323 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 AP3S2P59780 193 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 ERVS71-1P61550 626 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 REEP5Q00765 189 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 FABP5Q01469 135 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 DR1Q01658 176 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 AESQ08117 197 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 TSPAN31Q12999 210 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 DHRS2Q13268 280 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 OR2F1Q13607 317 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 SLC9A3R2Q15599 337 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 TMEM176BQ3YBM2 270 aaPredicted RBP2.23□□□□□ -2.05
USH2A-203ENST00000463147 ZNF660Q6AZW8 331 aaPredicted RBP2.23□□□□□ -2.05
USH2A-203ENST00000463147 SPINT4Q6UDR6 99 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 SCXQ7RTU7 201 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 SLC51BQ86UW2 128 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 C1orf174Q8IYL3 243 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 C3orf22Q8N5N4 141 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 TMEM86BQ8N661 226 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 ZFAND2AQ8N6M9 145 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 OR51D1Q8NGF3 324 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 Q8WTZ3 238 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 DNAJC9Q8WXX5 260 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 ANKRD36BP1Q96IX9 119 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 PRAP1Q96NZ9 151 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 CYTL1Q9NRR1 136 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 DNAJC12Q9UKB3 198 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 PCYT1BQ9Y5K3 369 aaPredicted RBP2.23□□□□□ -2.05
USH2A-203ENST00000463147 TRAPPC1Q9Y5R8 145 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 NUP160Q12769 1436 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 ADGRL3Q9HAR2 1447 aa2.23□□□□□ -2.05
USH2A-203ENST00000463147 CDC42BPAQ5VT25 1732 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 ATG2BQ96BY7 2078 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 ASXL1Q8IXJ9 1541 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 NLRC5Q86WI3 1866 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 FANCAO15360 1455 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 OTOFQ9HC10 1997 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 LAMC1P11047 1609 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 SMARCA4P51532 1647 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 BIVM-ERCC5R4GMW8 1640 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 TRBV24-1A0A075B6N3 115 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 OR6C70A6NIJ9 312 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 TMEM114B3SHH9 223 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 SH2D1AO60880 128 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 IGHMP01871 453 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 OPN1SWP03999 348 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 IFNA16P05015 189 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 ZNF14P17017 642 aaPredicted RBP2.22□□□□□ -2.05
USH2A-203ENST00000463147 PRPS1L1P21108 318 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms