RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 MRPS26Q9BYN8 205 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZFP57Q9NU63 452 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 RDH8Q9NYR8 311 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 PIPOXQ9P0Z9 390 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 SPATA2Q9UM82 520 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 A0A0A6YYH2 397 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 A6NJ64 397 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 CCL24O00175 119 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 BET1O15155 118 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 HSPA12AO43301 675 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 TMEM127O75204 238 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 SCGNO76038 276 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 GABARAPO95166 117 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 NDUFA3O95167 84 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 RPLP1P05386 114 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 TFAP2AP05549 437 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 PTHLHP12272 177 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZBTB25P24278 435 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 GPR12P47775 334 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 SERPINB10P48595 397 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 LINC00205P59089 165 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 VBP1P61758 197 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 CFHR3Q02985 330 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 FHL3Q13643 280 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 ARFRP1Q13795 201 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 KIR2DS1Q14954 304 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 ARL6IP1Q15041 203 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 CTF1Q16619 201 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 PNLIPRP3Q17RR3 467 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 GLDNQ6ZMI3 551 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 SLC35E3Q7Z769 313 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 ANKRD13BQ86YJ7 626 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 H1FOOQ8IZA3 346 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 COMMD1Q8N668 190 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 RNF152Q8N8N0 203 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR5AN1Q8NGI8 311 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 EDARADDQ8WWZ3 215 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 SLC25A46Q96AG3 418 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 ABCG5Q9H222 651 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 LIN7CQ9NUP9 197 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 SCOCQ9UIL1 159 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 RNF150Q9ULK6 438 aa6.18□□□□□ -1.42
CDC42BPA-210ENST00000462553 TRAV18A0A075B6X5 111 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR5H14A6NHG9 310 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 NCBP2LA6PVI3 153 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 C3orf84H3BNL1 204 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 RAMP3O60896 148 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 TALDO1P37837 337 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 RAB25P57735 213 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 GNG2P59768 71 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 ACTBP60709 375 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 MRPS15P82914 257 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 NDPQ00604 133 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 MMDQ15546 238 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 UBE2NLQ5JXB2 153 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 GVQW1Q8N7I0 195 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF383Q8NA42 475 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 NPBQ8NG41 125 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR8H1Q8NGG4 311 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR8U1Q8NH10 309 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 SNAPC3Q92966 411 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 ASCL2Q99929 193 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR2D2Q9H210 308 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 AUNIPQ9H7T9 357 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 SDHAF2Q9NX18 166 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF107Q9UII5 783 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 ANAPC10Q9UM13 185 aa6.17□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGHV7-81A0A0B4J1V7 117 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGKV1D-13A0A0B4J2D9 117 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 AP4M1O00189 453 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 NBR2O15453 112 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 XRCC3O43542 346 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 TUSC2O75896 110 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGLV2-14P01704 120 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 HLA-DRB1P01911 266 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGKV1-16P04430 117 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 EIF4EP06730 217 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR8U9P0C7N5 309 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGKV1-13P0DP09 117 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 CDX1P47902 265 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 TAS2R20P59543 309 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 SLC35B1P78383 322 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 PITPNAQ00169 270 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 FOXE3Q13461 319 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 C5orf64Q2M2E5 130 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 CASC10Q5T4H9 136 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 C9orf66Q5T8R8 295 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 ASPHD1Q5U4P2 390 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 GPR107Q5VW38 600 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 TEX38Q6PEX7 206 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 CROCCP3Q8IVE0 287 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 FOXRED2Q8IWF2 684 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 DRAXINQ8NBI3 349 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR5M8Q8NGP6 311 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR10J5Q8NHC4 309 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 MYOZ3Q8TDC0 251 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 ST6GALNAC5Q9BVH7 336 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 DCSTAMPQ9H295 470 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms