RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 MMP24Q9Y5R2 645 aa5.61□□□□□ -1.51
MSH2-204ENST00000461394 PCNX1Q96RV3 2341 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 SAA2-SAA4A0A096LPE2 208 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CLEC18AA5D8T8 446 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 LINC00862A6NCI5 91 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 LINC00473A8K010 186 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CEBPZOSA8MTT3 80 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 H3BP45 60 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 C19orf84I3L1E1 186 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 SYNGR2O43760 224 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CHST1O43916 411 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 MMP23AO75900 390 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 JTBO76095 146 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 LY6HO94772 140 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 HPRT1P00492 218 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 IGKV1-39P01597 117 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 IGKV1D-39P04432 117 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 SOD3P08294 240 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 SAA2P0DJI9 122 aaPredicted RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 CGB3P0DN86 165 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CGB7P0DN87 165 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 MMP9P14780 707 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 IL3RAP26951 378 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 DUTP33316 252 aaKnown RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 CDKN1AP38936 164 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 TMEM33P57088 247 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 EWSR1Q01844 656 aaKnown RBP eCLIP5.6□□□□□ -1.51
MSH2-204ENST00000461394 TMEM267Q0VDI3 215 aaPredicted RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 CLINT1Q14677 625 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CT45A1Q5HYN5 189 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 NCR3LG1Q68D85 454 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 TMEM200BQ69YZ2 307 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 RPL7L1Q6DKI1 246 aaKnown RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 TCF23Q7RTU1 214 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 STX12Q86Y82 276 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 CLEC18CQ8NCF0 446 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 OR10A7Q8NGE5 316 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 OR1S2Q8NGQ3 325 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 OR10X1Q8NGY0 326 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 OR4A16Q8NH70 328 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 OR4S2Q8NH73 311 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CT45A3Q8NHU0 189 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 STOML3Q8TAV4 291 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 TMED6Q8WW62 240 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 NEIL1Q96FI4 390 aaPredicted RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 ADTRPQ96IZ2 230 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CXorf58Q96LI9 332 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 FAM210AQ96ND0 272 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 RAB40CQ96S21 281 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 IFI27L2Q9H2X8 130 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 PSENENQ9NZ42 101 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 KAAG1Q9UBP8 84 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 CTSZQ9UBR2 303 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 MIOXQ9UGB7 285 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 RPUSD1Q9UJJ7 312 aaKnown RBP5.6□□□□□ -1.51
MSH2-204ENST00000461394 NUP50Q9UKX7 468 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 ICE1Q9Y2F5 2266 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 PIEZO2Q9H5I5 2752 aa5.6□□□□□ -1.51
MSH2-204ENST00000461394 RPS10-NUDT3A0A1W2PQS6 291 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 IGSF23A1L1A6 192 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 A6NNC1 897 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 ZNF705EA8MWA4 302 aaPredicted RBP5.59□□□□□ -1.51
MSH2-204ENST00000461394 TEX46H3BTG2 121 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 H7C2Y5 167 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 ITGB1BP1O14713 200 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 PITX3O75364 302 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 CST7O76096 145 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 CRYZL1O95825 349 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 IFNA17P01571 189 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 IGHV2-70P01814 119 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 APOA2P02652 100 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 PRB1P04280 392 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 GPR6P46095 362 aaPredicted RBP5.59□□□□□ -1.51
MSH2-204ENST00000461394 DYNLT3P51808 116 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 ZNF134P52741 427 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 LINC00205P59089 165 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 OR2B8PP59922 312 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 ERVFRD-1P60508 538 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 GNB2P62879 340 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 NHLH2Q02577 135 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 EIF4EBP1Q13541 118 aaPredicted RBP5.59□□□□□ -1.51
MSH2-204ENST00000461394 RTL8BQ17RB0 113 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 SPANXN5Q5MJ07 72 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 HEPN1Q6WQI6 88 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 TMEM217Q8N7C4 229 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 HSD17B11Q8NBQ5 300 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 LRRC20Q8TCA0 184 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 BSCL2Q96G97 398 aaPredicted RBP5.59□□□□□ -1.51
MSH2-204ENST00000461394 AGMATQ9BSE5 352 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 RBKSQ9H477 322 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 ENY2Q9NPA8 101 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 CYTL1Q9NRR1 136 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 FAM212BQ9NTI7 297 aaPredicted RBP5.59□□□□□ -1.51
MSH2-204ENST00000461394 SLC35D1Q9NTN3 355 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 LYRM2Q9NU23 88 aaPredicted RBP5.59□□□□□ -1.51
MSH2-204ENST00000461394 ONECUT1Q9UBC0 465 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 IGF2RP11717 2491 aa5.59□□□□□ -1.51
MSH2-204ENST00000461394 ARFGEF3Q5TH69 2177 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms