RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SLC5A7Q9GZV3 580 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 SDHAF2Q9NX18 166 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 NCBP2LA6PVI3 153 aaKnown RBP8.53□□□□□ -1.04
UBR4-208ENST00000459947 RBFOX2O43251 390 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBR4-208ENST00000459947 TSPAN5P62079 268 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 SRSF2Q01130 221 aaKnown RBP8.53□□□□□ -1.04
UBR4-208ENST00000459947 TMEM177Q53S58 311 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 OVCH2Q7RTZ1 564 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 OR4X2Q8NGF9 303 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 OR4S2Q8NH73 311 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 VSTM2AQ8TAG5 236 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 MOB3AQ96BX8 217 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 BATF3Q9NR55 127 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 PIGBOS1A0A0B4J2F0 54 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 HAX1O00165 279 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 IGHG2P01859 326 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 IL18Q14116 193 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 UTF1Q5T230 341 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 ZNF486Q96H40 463 aaPredicted RBP8.53□□□□□ -1.04
UBR4-208ENST00000459947 SCGB3A2Q96PL1 93 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 MIXL1Q9H2W2 232 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 RNF150Q9ULK6 438 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 CELSR1Q9NYQ6 3014 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 SLC6A1P30531 599 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 RPL39P5Q59GN2 51 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 TMEM68Q96MH6 324 aa8.53□□□□□ -1.04
UBR4-208ENST00000459947 DISC1C4P0D8 188 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 B3GALNT1O75752 331 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 RPS16P62249 146 aaKnown RBP8.52□□□□□ -1.05
UBR4-208ENST00000459947 DIAPH2-AS1Q14236 149 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 C5orf64Q2M2E5 130 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 C9orf152Q5JTZ5 239 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 SNAPC3Q92966 411 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 ELF5Q9UKW6 265 aaPredicted RBP8.52□□□□□ -1.05
UBR4-208ENST00000459947 FABP12A6NFH5 140 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 RRHO14718 337 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 FBXO24O75426 580 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 AADACP22760 399 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 NFYAP23511 347 aaPredicted RBP8.52□□□□□ -1.05
UBR4-208ENST00000459947 RELBQ01201 579 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 PLGLAQ15195 96 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 SPANXN2Q5MJ10 180 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 KCTD9Q7L273 389 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 LAX1Q8IWV1 398 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 KLHDC1Q8N7A1 406 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 Q8N9W7 124 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 WNT10AQ9GZT5 417 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 IGHV3-72A0A0B4J1Y9 119 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 DUTP33316 252 aaKnown RBP8.52□□□□□ -1.05
UBR4-208ENST00000459947 TMEM267Q0VDI3 215 aaPredicted RBP8.52□□□□□ -1.05
UBR4-208ENST00000459947 GVQW1Q8N7I0 195 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 TEX45Q8NA69 505 aa8.52□□□□□ -1.05
UBR4-208ENST00000459947 CTDSP2O14595 271 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 HRASP01112 189 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 HNF4GQ14541 408 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 ABCA11PQ4W5N1 156 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 SLC38A6Q8IZM9 456 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 CADM3Q8N126 398 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 ZFAND1Q8TCF1 268 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 PARP12Q9H0J9 701 aaKnown RBP8.51□□□□□ -1.05
UBR4-208ENST00000459947 COMMD9Q9P000 198 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 GPR31O00270 319 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 ATG12O94817 140 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 VDAC1P21796 283 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 C2orf68Q2NKX9 166 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 CCDC71LQ8N9Z2 235 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 ZNF383Q8NA42 475 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 SECTM1Q8WVN6 248 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 CITED1Q99966 193 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 SHOXO15266 292 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 CD74P04233 296 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 FGF2P09038 288 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 AKAIN1P0CW23 69 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 TNFSF8P32971 234 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 SURF2Q15527 256 aaPredicted RBP8.51□□□□□ -1.05
UBR4-208ENST00000459947 FAM71E2Q8N5Q1 922 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 OR52I2Q8NH67 350 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 OR4A5Q8NH83 315 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 ZNF2Q9BSG1 426 aaPredicted RBP8.51□□□□□ -1.05
UBR4-208ENST00000459947 SERTAD4Q9NUC0 356 aa8.51□□□□□ -1.05
UBR4-208ENST00000459947 MAP1AP78559 2803 aaPredicted RBP8.5□□□□□ -1.05
UBR4-208ENST00000459947 FCER2P06734 321 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 MAS1LP35410 378 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 CRIP2P52943 208 aaPredicted RBP8.5□□□□□ -1.05
UBR4-208ENST00000459947 LIN54Q6MZP7 749 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 FAM53AQ6NSI3 398 aaPredicted RBP8.5□□□□□ -1.05
UBR4-208ENST00000459947 CENPVQ7Z7K6 275 aaPredicted RBP8.5□□□□□ -1.05
UBR4-208ENST00000459947 NDUFA11Q86Y39 141 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 BVESQ8NE79 360 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 TCTEX1D2Q8WW35 142 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 HARBI1Q96MB7 349 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 PRRT1Q99946 306 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 PLSCR3Q9NRY6 295 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 ZFP57Q9NU63 452 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 JMJD1CQ15652 2540 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 RAB3DO95716 219 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 HRH1P35367 487 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 UBE2KP61086 200 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 DDB2Q92466 427 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms