RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SEC61A1P61619 476 aaKnown RBP8.55□□□□□ -1.04
USP39-210ENST00000459775 ZNF181Q2M3W8 571 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 TEX36Q5VZQ5 186 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 ATRAIDQ6UW56 229 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 ZNF782Q6ZMW2 699 aaPredicted RBP8.55□□□□□ -1.04
USP39-210ENST00000459775 DNM1P46Q6ZS02 220 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 MTURNQ8N3F0 131 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 NEU4Q8WWR8 484 aaPredicted RBP8.55□□□□□ -1.04
USP39-210ENST00000459775 TSNAXQ99598 290 aaKnown RBP8.55□□□□□ -1.04
USP39-210ENST00000459775 MTFP1Q9UDX5 166 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 HIVEP1P15822 2718 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 FAM90A10PA6NDY2 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A18PA6NE21 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A16PA6NEW6 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 C5orf52A6NGY3 159 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A20PA6NIJ5 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A8PA6NJQ4 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A7PA6NKC0 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A22PA8MWA6 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A12PA8MX19 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A5PA8MXJ8 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A23PA8MXZ1 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 TNFRSF13BO14836 293 aaPredicted RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 SIVA1O15304 175 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 GGCTO75223 188 aaKnown RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 MT-ND4P03905 459 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A15PP0C7V4 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A13PP0C7W8 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A14PP0C7W9 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FAM90A24PP0C7X0 464 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 SPNP16150 400 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 HLA-GP17693 338 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 LMO1P25800 156 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 GNRHRP30968 328 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 RFX2P48378 723 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 ERVFRD-1P60508 538 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 BAIAP2L2Q6UXY1 529 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 ZNF788Q6ZQV5 615 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 MRPL30Q8TCC3 161 aaKnown RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 VPS25Q9BRG1 176 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 ELOVL1Q9BW60 279 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 C11orf54Q9H0W9 315 aaPredicted RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 METTL1Q9UBP6 276 aaKnown RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 KIF25Q9UIL4 384 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 TSSC4Q9Y5U2 329 aaPredicted RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 SVEP1Q4LDE5 3571 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 AKAP9Q99996 3911 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 TRAV38-1A0A0B4J264 116 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 A8MZ25 164 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 SDCBPO00560 298 aaPredicted RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 SCGNO76038 276 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 PMP2P02689 132 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FCGR3AP08637 254 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 EDDM3BP56851 147 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 KLF9Q13886 244 aaPredicted RBP8.54□□□□□ -1.04
USP39-210ENST00000459775 TMED4Q7Z7H5 227 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 PHB2Q99623 299 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 DLL4Q9NR61 685 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 FLVCR2Q9UPI3 526 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 NF1P21359 2839 aa8.54□□□□□ -1.04
USP39-210ENST00000459775 CEACAM18A8MTB9 384 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 K7N7A8 449 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 NAPSAO96009 420 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 RPS16P62249 146 aaKnown RBP8.53□□□□□ -1.04
USP39-210ENST00000459775 RPL19P84098 196 aaKnown RBP8.53□□□□□ -1.04
USP39-210ENST00000459775 ANKRD55Q3KP44 614 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 UTF1Q5T230 341 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 LINC00596Q86U02 117 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 TOMM5Q8N4H5 51 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 OR56B4Q8NH76 319 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 TCTEX1D2Q8WW35 142 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 SDSLQ96GA7 329 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 ST6GAL2Q96JF0 529 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 SNX22Q96L94 193 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 ZNF665Q9H7R5 613 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 KPTNQ9Y664 436 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 MEIKINA0A087WXM9 373 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 ANKRD20A5PA0PJZ0 165 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 IFNL4K9M1U5 179 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 DVL1O14640 695 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 PHF1O43189 567 aaPredicted RBP8.53□□□□□ -1.04
USP39-210ENST00000459775 SCTP09683 121 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 HIST1H1BP16401 226 aaKnown RBP8.53□□□□□ -1.04
USP39-210ENST00000459775 HRH1P35367 487 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 AKR1C3P42330 323 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 INPP1P49441 399 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 PRB3Q04118 309 aaPredicted RBP8.53□□□□□ -1.04
USP39-210ENST00000459775 ZNF497Q6ZNH5 498 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 BEST4Q8NFU0 473 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 OR13A1Q8NGR1 328 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 OR13D1Q8NGV5 346 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 RFESDQ8TAC1 157 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 DEDD2Q8WXF8 326 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 CREB3L1Q96BA8 519 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 SRSF8Q9BRL6 282 aaKnown RBP8.53□□□□□ -1.04
USP39-210ENST00000459775 NDUFAF3Q9BU61 184 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 TMPRSS13Q9BYE2 586 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 BPESC1Q9GZL8 116 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 ARV1Q9H2C2 271 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms