RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 CD1BP29016 333 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 CCR6P51684 374 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 HILS1P60008 231 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 PHLDA2Q53GA4 152 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 RBMS3Q6XE24 437 aaKnown RBP13.51□□□□□ -0.25
TRIM39-211ENST00000458516 ZNF66Q6ZN08 573 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 TMEM86BQ8N661 226 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 ZNF486Q96H40 463 aaPredicted RBP13.51□□□□□ -0.25
TRIM39-211ENST00000458516 ADTRPQ96IZ2 230 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 HSD17B10Q99714 261 aaKnown RBP13.51□□□□□ -0.25
TRIM39-211ENST00000458516 DPAGT1Q9H3H5 408 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 GPR132Q9UNW8 380 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 TCF19Q9Y242 345 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 VSIG4Q9Y279 399 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 PGLYRP1O75594 196 aaPredicted RBP13.5□□□□□ -0.25
TRIM39-211ENST00000458516 IGKV1D-33P01593 117 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 IGKV1-33P01594 117 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 CTSDP07339 412 aaPredicted RBP13.5□□□□□ -0.25
TRIM39-211ENST00000458516 RND3P61587 244 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 SLC9A3R2Q15599 337 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 KCTD9Q7L273 389 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 THNSL2Q86YJ6 484 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 ZDHHC22Q8N966 263 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 OR5R1Q8NH85 324 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 ZFAND1Q8TCF1 268 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 CAPSLQ8WWF8 208 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 C5orf66Q9H5L9 145 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 SLC2A9Q9NRM0 540 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 POMT1Q9Y6A1 747 aa13.5□□□□□ -0.25
TRIM39-211ENST00000458516 A6NDX4 124 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 APOA2P02652 100 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 RLN1P04808 185 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 EBI3Q14213 229 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 RBMS2Q15434 407 aaKnown RBP13.49□□□□□ -0.25
TRIM39-211ENST00000458516 LY6EQ16553 131 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 C16orf87Q6PH81 154 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 CCBE1Q6UXH8 406 aaPredicted RBP13.49□□□□□ -0.25
TRIM39-211ENST00000458516 CMTM1Q8IZ96 169 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 OR51H1Q8NH63 302 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 TCTEX1D2Q8WW35 142 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 DUX5Q96PT3 197 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 SLC25A21Q9BQT8 299 aaPredicted RBP13.49□□□□□ -0.25
TRIM39-211ENST00000458516 RTBDNQ9BSG5 229 aaPredicted RBP13.49□□□□□ -0.25
TRIM39-211ENST00000458516 TNFRSF19Q9NS68 423 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 SLC35D1Q9NTN3 355 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 WASHC3Q9Y3C0 194 aa13.49□□□□□ -0.25
TRIM39-211ENST00000458516 BTBD17A6NE02 478 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 NDUFB6O95139 128 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 SLC6A1P30531 599 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 MC5RP33032 325 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 PIGPP57054 158 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 BRWD1-AS2P59051 145 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 CATR1Q13166 79 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 ABCA11PQ4W5N1 156 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 PDPNQ86YL7 162 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 Q8N6K4 173 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 EAF1Q96JC9 268 aaPredicted RBP13.48□□□□□ -0.25
TRIM39-211ENST00000458516 SCGB3A2Q96PL1 93 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 CHIAQ9BZP6 476 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 VPREB3Q9UKI3 123 aa13.48□□□□□ -0.25
TRIM39-211ENST00000458516 C14orf166Q9Y224 244 aaKnown RBP13.48□□□□□ -0.25
TRIM39-211ENST00000458516 A0A0A6YYJ9 748 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 CLDN34H7C241 214 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 TCF21O43680 179 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 MOSP00540 346 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 IGKV1-16P04430 117 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 FAM106CPP0CH98 169 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 TMEM11P17152 192 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 TAGLNQ01995 201 aaKnown RBP13.47□□□□□ -0.25
TRIM39-211ENST00000458516 HES1Q14469 280 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 OR2B11Q5JQS5 317 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 MZT2BQ6NZ67 158 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 TMEM219Q86XT9 240 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 ADAD2Q8NCV1 583 aaKnown RBP13.47□□□□□ -0.25
TRIM39-211ENST00000458516 OR2T10Q8NGZ9 312 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 TMEM230Q96A57 120 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 PALMDQ9NP74 551 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 PRELID3BQ9Y3B1 194 aa13.47□□□□□ -0.25
TRIM39-211ENST00000458516 RNF212BA8MTL3 300 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 H7C2Y5 167 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 FCGR3BO75015 233 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 RRASP10301 218 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 F2RP25116 425 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 S100GP29377 79 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 DEFA1P59665 94 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 DEFA3P59666 94 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 UBA52P62987 128 aaKnown RBP13.46□□□□□ -0.25
TRIM39-211ENST00000458516 CCDC71LQ8N9Z2 235 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 POC5Q8NA72 575 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 RITA1Q96K30 269 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 JMJD8Q96S16 334 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 COPZ2Q9P299 210 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 PITPNC1Q9UKF7 332 aa13.46□□□□□ -0.25
TRIM39-211ENST00000458516 MPPED1O15442 326 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 CHST1O43916 411 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 OR2F2O95006 317 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 CRYZL1O95825 349 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 TCRBP04435 133 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 KIR2DS2P43631 304 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms