RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CDK1P06493 297 aa16.48■□□□□ 0.23
CPNE1-220ENST00000458038 SCTP09683 121 aa16.48■□□□□ 0.23
CPNE1-220ENST00000458038 SERPINB10P48595 397 aa16.48■□□□□ 0.23
CPNE1-220ENST00000458038 VEGFCP49767 419 aa16.48■□□□□ 0.23
CPNE1-220ENST00000458038 TAGLNQ01995 201 aaKnown RBP16.48■□□□□ 0.23
CPNE1-220ENST00000458038 TATDN3Q17R31 274 aa16.48■□□□□ 0.23
CPNE1-220ENST00000458038 OR5T1Q8NG75 326 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 OR9G4Q8NGQ1 327 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 CMSS1Q9BQ75 279 aaKnown RBP16.47■□□□□ 0.23
CPNE1-220ENST00000458038 SPATA25Q9BR10 227 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 HDHD3Q9BSH5 251 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-220ENST00000458038 KCNK15Q9H427 330 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 EDA2RQ9HAV5 297 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 PLGRKTQ9HBL7 147 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 SLC35D1Q9NTN3 355 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 SIGLEC8Q9NYZ4 499 aa16.47■□□□□ 0.23
CPNE1-220ENST00000458038 TRDCB7Z8K6 153 aa16.46■□□□□ 0.23
CPNE1-220ENST00000458038 CBX3Q13185 183 aa16.46■□□□□ 0.23
CPNE1-220ENST00000458038 USMG5Q96IX5 58 aa16.46■□□□□ 0.23
CPNE1-220ENST00000458038 RDH8Q9NYR8 311 aa16.46■□□□□ 0.23
CPNE1-220ENST00000458038 CSMD3Q7Z407 3707 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 FOXI3A8MTJ6 420 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-220ENST00000458038 M0R1X1 148 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 TMEM50BP56557 158 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 TRAM1Q15629 374 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 LCN12Q6JVE5 192 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 GTSCR1Q86UQ5 136 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 OR56B1Q8NGI3 324 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 OR4A4PQ8NGN8 299 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 PECRQ9BY49 303 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 TINAGL1Q9GZM7 467 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-220ENST00000458038 SCN3BQ9NY72 215 aa16.45■□□□□ 0.22
CPNE1-220ENST00000458038 PEF1Q9UBV8 284 aaKnown RBP16.45■□□□□ 0.22
CPNE1-220ENST00000458038 LSM2Q9Y333 95 aaKnown RBP16.45■□□□□ 0.22
CPNE1-220ENST00000458038 ANKRD34BA5PLL1 514 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 PTGES3LE9PB15 166 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 ARL6IP5O75915 188 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 DIRAS3O95661 229 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 IFNA6P05013 189 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 MRPS15P82914 257 aaKnown RBP16.44■□□□□ 0.22
CPNE1-220ENST00000458038 RCN1Q15293 331 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 P2RY14Q15391 338 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 MED22Q15528 200 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 RAB11BQ15907 218 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 ZNF343Q6P1L6 599 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 HAPLN4Q86UW8 402 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 UFD1Q92890 307 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 ARHGAP5-AS1Q96IT6 56 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 VCXQ9H320 206 aa16.44■□□□□ 0.22
CPNE1-220ENST00000458038 IGKV1-6A0A0C4DH72 117 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 IGLV2-23P01705 113 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 CRYGBP07316 175 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 RRASP10301 218 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 PSMA1P25786 263 aaKnown RBP16.43■□□□□ 0.22
CPNE1-220ENST00000458038 PSMD7P51665 324 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 LINC00205P59089 165 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 SSBP2P81877 361 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-220ENST00000458038 OGFRL1Q5TC84 451 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-220ENST00000458038 ZFAND6Q6FIF0 208 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 Q8N402 240 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 CENPOQ9BU64 300 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 TUBA4BQ9H853 241 aa16.43■□□□□ 0.22
CPNE1-220ENST00000458038 SYNJ2BPP57105 145 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 PJVKQ0ZLH3 352 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 HAGHQ16775 308 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 TMEM177Q53S58 311 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 LIPKQ5VXJ0 399 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 IL34Q6ZMJ4 242 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 OR10J5Q8NHC4 309 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 HARBI1Q96MB7 349 aa16.42■□□□□ 0.22
CPNE1-220ENST00000458038 CASQ2O14958 399 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-220ENST00000458038 OR2A4O95047 310 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 SNRPBP14678 240 aaKnown RBP16.41■□□□□ 0.22
CPNE1-220ENST00000458038 TPBGQ13641 420 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 RTL8BQ17RB0 113 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 TMEM91Q6ZNR0 172 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 OR2K2Q8NGT1 345 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 SNAPC3Q92966 411 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 TMEM203Q969S6 136 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 FAM3DQ96BQ1 224 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 GFI1Q99684 422 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 LYSTQ99698 3801 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 SDHAF2Q9NX18 166 aa16.41■□□□□ 0.22
CPNE1-220ENST00000458038 A0A0B4J203 849 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 SHOXO15266 292 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 FABP7O15540 132 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 DENRO43583 198 aaKnown RBP16.4■□□□□ 0.22
CPNE1-220ENST00000458038 AIREO43918 545 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 CD3GP09693 182 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 RPEL1Q2QD12 228 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 C2orf76Q3KRA6 126 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 TEX45Q8NA69 505 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 BVESQ8NE79 360 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 IL17DQ8TAD2 202 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 ADTRPQ96IZ2 230 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 THAP7Q9BT49 309 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-220ENST00000458038 CABLES2Q9BTV7 478 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 OR2D2Q9H210 308 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 PEMTQ9UBM1 199 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 RAB22AQ9UL26 194 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms