RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 METTL15A6NJ78 407 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 NDUFAB1O14561 156 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 ARPC2O15144 300 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 MPV17LQ2QL34 196 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 ZNF529Q6P280 563 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
SF3B4-202ENST00000457312 ZNF383Q8NA42 475 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 OR10G2Q8NGC3 310 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 OR13C3Q8NGS6 347 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 SRSF12Q8WXF0 261 aaKnown RBP11.42□□□□□ -0.58
SF3B4-202ENST00000457312 UFC1Q9Y3C8 167 aa11.42□□□□□ -0.58
SF3B4-202ENST00000457312 CTSDP07339 412 aaPredicted RBP11.41□□□□□ -0.58
SF3B4-202ENST00000457312 NPY1RP25929 384 aa11.41□□□□□ -0.58
SF3B4-202ENST00000457312 ICAM4Q14773 271 aa11.41□□□□□ -0.58
SF3B4-202ENST00000457312 C19orf35Q6ZS72 473 aa11.41□□□□□ -0.58
SF3B4-202ENST00000457312 ABHD14BQ96IU4 210 aa11.41□□□□□ -0.58
SF3B4-202ENST00000457312 CYYR1Q96J86 154 aa11.41□□□□□ -0.58
SF3B4-202ENST00000457312 SIKE1Q9BRV8 207 aa11.41□□□□□ -0.58
SF3B4-202ENST00000457312 TMED3Q9Y3Q3 217 aa11.41□□□□□ -0.58
SF3B4-202ENST00000457312 A0A1B0GW64 132 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 MRPS14O60783 128 aaKnown RBP11.4□□□□□ -0.58
SF3B4-202ENST00000457312 CDRT1O95170 752 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 ISG15P05161 165 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 HAMPP81172 84 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 TMEM236Q5W0B7 351 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 GLT8D1Q68CQ7 371 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 BCDIN3DQ7Z5W3 292 aaKnown RBP11.4□□□□□ -0.58
SF3B4-202ENST00000457312 TTC9CQ8N5M4 171 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 FEVQ99581 238 aa11.4□□□□□ -0.58
SF3B4-202ENST00000457312 SAMHD1Q9Y3Z3 626 aaKnown RBP11.4□□□□□ -0.58
SF3B4-202ENST00000457312 IGHV3-35A0A0C4DH35 117 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 A0A1W2PQL4 384 aaPredicted RBP11.39□□□□□ -0.59
SF3B4-202ENST00000457312 PROP1O75360 226 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 SULT1C4O75897 302 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 TNXAQ16473 311 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 LIPKQ5VXJ0 399 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 ZNF554Q86TJ5 538 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 OR2G2Q8NGZ5 317 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 PELI1Q96FA3 418 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 IL36GQ9NZH8 169 aa11.39□□□□□ -0.59
SF3B4-202ENST00000457312 C4BPBP20851 252 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 ZNF66Q6ZN08 573 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 TMEM190Q8WZ59 177 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 NSMCE2Q96MF7 247 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 GPER1Q99527 375 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 AGMATQ9BSE5 352 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 KRTAP1-5Q9BYS1 174 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 SLC2A9Q9NRM0 540 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 KCNIP1Q9NZI2 227 aa11.38□□□□□ -0.59
SF3B4-202ENST00000457312 MCRIP1C9JLW8 97 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 APOA2P02652 100 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 SERPINA2P20848 420 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 CMC4P56277 68 aaPredicted RBP11.37□□□□□ -0.59
SF3B4-202ENST00000457312 HACD2Q6Y1H2 254 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 GALMQ96C23 342 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 HARBI1Q96MB7 349 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 TVP23BQ9NYZ1 205 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 FRRS1LQ9P0K9 344 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 TBC1D24Q9ULP9 559 aa11.37□□□□□ -0.59
SF3B4-202ENST00000457312 A0A1W2PP11 408 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 SC5DO75845 299 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 PSMB6P28072 239 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 TFPI2P48307 235 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 NANOS3P60323 173 aaKnown RBP11.36□□□□□ -0.59
SF3B4-202ENST00000457312 CDPF1Q6NVV7 123 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 WDR93Q6P2C0 686 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 MRPL30Q8TCC3 161 aaKnown RBP11.36□□□□□ -0.59
SF3B4-202ENST00000457312 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 CPNE2Q96FN4 548 aaPredicted RBP11.36□□□□□ -0.59
SF3B4-202ENST00000457312 ATG101Q9BSB4 218 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 ZNF436Q9C0F3 470 aaPredicted RBP11.36□□□□□ -0.59
SF3B4-202ENST00000457312 REEP1Q9H902 201 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 DAZ1Q9NQZ3 744 aaKnown RBP11.36□□□□□ -0.59
SF3B4-202ENST00000457312 PGPEP1Q9NXJ5 209 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 STEAP1Q9UHE8 339 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 GNG8Q9UK08 70 aa11.36□□□□□ -0.59
SF3B4-202ENST00000457312 SRRM4A7MD48 611 aaKnown RBP11.35□□□□□ -0.59
SF3B4-202ENST00000457312 PRKYO43930 277 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 EDF1O60869 148 aaKnown RBP11.35□□□□□ -0.59
SF3B4-202ENST00000457312 ATP6V1B2P21281 511 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 PSME3P61289 254 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 PRSS8Q16651 343 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 TP53I3Q53FA7 332 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 RAB12Q6IQ22 244 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 TMEM88Q6PEY1 159 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 OR51A2Q8NGJ7 313 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 METTL9Q9H1A3 318 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 SPACA1Q9HBV2 294 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 SLC35D1Q9NTN3 355 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 GMPPBQ9Y5P6 360 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 ETV7Q9Y603 341 aa11.35□□□□□ -0.59
SF3B4-202ENST00000457312 CA11O75493 328 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 COX4I1P13073 169 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 OSMP13725 252 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 FUT3P21217 361 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms