RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ZNF660Q6AZW8 331 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-203ENST00000456847 Q6ZS49 121 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 TSPAN14Q8NG11 270 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 FLYWCH2Q96CP2 140 aaKnown RBP12.69□□□□□ -0.38
CPSF6-203ENST00000456847 RAX2Q96IS3 184 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 IGKV1D-8A0A087WSZ0 117 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 SPDEFO95238 335 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 SCAND1P57086 179 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 NDPQ00604 133 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 PSG5Q15238 335 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 OR5H6Q8NGV6 325 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 P2RX4Q99571 388 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 MCRIP2Q9BUT9 160 aaKnown RBP12.68□□□□□ -0.38
CPSF6-203ENST00000456847 NOTCH3Q9UM47 2321 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 A0A1W2PN81 502 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 CHRNA7P36544 502 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 CX3CL1P78423 397 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 ZNF260Q3ZCT1 412 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 H1FOOQ8IZA3 346 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-203ENST00000456847 C4orf3Q8WVX3 66 aa12.68□□□□□ -0.38
CPSF6-203ENST00000456847 J3QRK9 145 aa12.67□□□□□ -0.38
CPSF6-203ENST00000456847 AIREO43918 545 aa12.67□□□□□ -0.38
CPSF6-203ENST00000456847 CA2P00918 260 aa12.67□□□□□ -0.38
CPSF6-203ENST00000456847 PPIFP30405 207 aaKnown RBP12.67□□□□□ -0.38
CPSF6-203ENST00000456847 DCSTAMPQ9H295 470 aa12.67□□□□□ -0.38
CPSF6-203ENST00000456847 GAB2Q9UQC2 676 aa12.67□□□□□ -0.38
CPSF6-203ENST00000456847 FBXO7Q9Y3I1 522 aa12.67□□□□□ -0.38
CPSF6-203ENST00000456847 TRAV18A0A075B6X5 111 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 FCN1O00602 326 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 SLC25A17O43808 307 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 HOXD3P31249 432 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-203ENST00000456847 TMEM267Q0VDI3 215 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-203ENST00000456847 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 BVESQ8NE79 360 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 SLC25A38Q96DW6 304 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 C5orf30Q96GV9 206 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 HARBI1Q96MB7 349 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 FAM103A1Q9BTL3 118 aaKnown RBP12.66□□□□□ -0.38
CPSF6-203ENST00000456847 FOXA2Q9Y261 457 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-203ENST00000456847 TGFBR1P36897 503 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 LSM3P62310 102 aaKnown RBP12.66□□□□□ -0.38
CPSF6-203ENST00000456847 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 PPP1R27Q86WC6 154 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 TCTEX1D1Q8N7M0 179 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 KLK15Q9H2R5 256 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 TPSG1Q9NRR2 321 aa12.66□□□□□ -0.38
CPSF6-203ENST00000456847 SHOXO15266 292 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 SSX5O60225 188 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 IGLV1-40P01703 118 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 NFYAP23511 347 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-203ENST00000456847 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-203ENST00000456847 CRIP2P52943 208 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-203ENST00000456847 GNB1P62873 340 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 TAGLNQ01995 201 aaKnown RBP12.65□□□□□ -0.38
CPSF6-203ENST00000456847 CNIH2Q6PI25 160 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 ARPC1AQ92747 370 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 YIPF6Q96EC8 236 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 ADTRPQ96IZ2 230 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 UBE2E2Q96LR5 201 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 OR5B12Q96R08 314 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 GNB4Q9HAV0 340 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 DIABLOQ9NR28 239 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 VSIG4Q9Y279 399 aa12.65□□□□□ -0.38
CPSF6-203ENST00000456847 RRASP10301 218 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 ARPC4P59998 168 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 CROCCP3Q8IVE0 287 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 ZNF491Q8N8L2 437 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 MINDY2Q8NBR6 621 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 GRPEL2Q8TAA5 225 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 MYOZ3Q8TDC0 251 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 A0A0A6YYH2 397 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 A6NJ64 397 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 TMEM127O75204 238 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 CNIH1O95406 144 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 LGALS7P47929 136 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 RAB9AP51151 201 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 ACTBL2Q562R1 376 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 ZNF562Q6V9R5 426 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 ZNF645Q8N7E2 425 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 OR11H1Q8NG94 326 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 ANXA10Q9UJ72 324 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 OR2W1Q9Y3N9 320 aa12.64□□□□□ -0.39
CPSF6-203ENST00000456847 DUTP33316 252 aaKnown RBP12.63□□□□□ -0.39
CPSF6-203ENST00000456847 FXYD3Q14802 87 aa12.63□□□□□ -0.39
CPSF6-203ENST00000456847 C19orf54Q5BKX5 351 aa12.63□□□□□ -0.39
CPSF6-203ENST00000456847 LFNGQ8NES3 379 aa12.63□□□□□ -0.39
CPSF6-203ENST00000456847 CASTOR1Q8WTX7 329 aa12.63□□□□□ -0.39
CPSF6-203ENST00000456847 NUBP2Q9Y5Y2 271 aa12.63□□□□□ -0.39
CPSF6-203ENST00000456847 PRKDCP78527 4128 aaKnown RBP12.63□□□□□ -0.39
CPSF6-203ENST00000456847 CRYZL1O95825 349 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 EGR2P11161 476 aaPredicted RBP12.62□□□□□ -0.39
CPSF6-203ENST00000456847 CD40LGP29965 261 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 TMEM177Q53S58 311 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 PYHIN1Q6K0P9 492 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 BEST4Q8NFU0 473 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms