RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 CT45A6P0DMU7 189 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 CT45A5P0DMU8 189 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 CT45A7P0DMV0 189 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 IGHV1-8P0DP01 117 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 IGHV3-43DP0DP04 118 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 OMGP23515 440 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 SSTR2P30874 369 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 NKX2-1P43699 371 aaPredicted RBP6.12□□□□□ -1.43
ERCC3-204ENST00000456257 GPR12P47775 334 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 THBS3P49746 956 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 LMO4P61968 165 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 DHRS7BQ6IAN0 325 aaPredicted RBP6.12□□□□□ -1.43
ERCC3-204ENST00000456257 HRNRQ86YZ3 2850 aaPredicted RBP6.12□□□□□ -1.43
ERCC3-204ENST00000456257 ZNF295-AS1Q8N0V1 137 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 SPAG16Q8N0X2 631 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 KIR3DL3Q8N743 410 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 BEND2Q8NDZ0 799 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 OR8B3Q8NGG8 313 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 OR5AN1Q8NGI8 311 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 SMIM8Q96KF7 97 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 OR8B2Q96RD0 313 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 RAB40CQ96S21 281 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 ARL6Q9H0F7 186 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 HSPB7Q9UBY9 170 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 RCL1Q9Y2P8 373 aaKnown RBP6.12□□□□□ -1.43
ERCC3-204ENST00000456257 SESN1Q9Y6P5 492 aa6.12□□□□□ -1.43
ERCC3-204ENST00000456257 PPIAL4CA0A0B4J2A2 164 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 A0A1W2PPH5 198 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 LINC00862A6NCI5 91 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 VWC2LB2RUY7 222 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 TOR1AO14656 332 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 BCL2L11O43521 198 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 RAMP3O60896 148 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 IFNA7P01567 189 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 LIPFP07098 398 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 PPIAL4GP0DN37 164 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 RRASP10301 218 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 CCL3L1P16619 93 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 ZNF16P17020 682 aaPredicted RBP6.11□□□□□ -1.43
ERCC3-204ENST00000456257 PRTN3P24158 256 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 RPL12P30050 165 aaKnown RBP6.11□□□□□ -1.43
ERCC3-204ENST00000456257 LINC00205P59089 165 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 PRAMEF5Q5TYX0 476 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 STPG2Q8N412 459 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 Q8N7P7 452 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 ZNF383Q8NA42 475 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 OR11H6Q8NGC7 330 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 OR52E5Q8NH55 327 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 OR9G1Q8NH87 305 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 TMEM186Q96B77 213 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 AIFM2Q9BRQ8 373 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 PCGF1Q9BSM1 259 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 GSX2Q9BZM3 304 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.11□□□□□ -1.43
ERCC3-204ENST00000456257 MED9Q9NWA0 146 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 KCNS2Q9ULS6 477 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 PRELID3BQ9Y3B1 194 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 AUP1Q9Y679 476 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 WSB1Q9Y6I7 421 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 RELNP78509 3460 aa6.11□□□□□ -1.43
ERCC3-204ENST00000456257 ARID1AO14497 2285 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 SAA2-SAA4A0A096LPE2 208 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 RPS10-NUDT3A0A1W2PQS6 291 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 C22orf46C9J442 243 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 M0R1X1 148 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 NDUFS8O00217 210 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 PPIHO43447 177 aaKnown RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 CHST1O43916 411 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 GPR137BO60478 399 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 NDUFS7O75251 213 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 LY6HO94772 140 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 S1PR2O95136 353 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 IGHV2-5P01817 119 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 SAA2P0DJI9 122 aaPredicted RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 ERVFRD-1P60508 538 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 POLR2GP62487 172 aaKnown RBP eCLIP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 UBA52P62987 128 aaKnown RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 EXOSC2Q13868 293 aaKnown RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 LRRC37A5PQ49AS3 106 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 TMEM177Q53S58 311 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 CLLU1Q5K131 121 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 THOC7Q6I9Y2 204 aaKnown RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 ZNF429Q86V71 674 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 FOXRED2Q8IWF2 684 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 PUSL1Q8N0Z8 303 aaKnown RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 ABHD12Q8N2K0 398 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 OR2C3Q8N628 320 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 UBAC2Q8NBM4 344 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 OR8H1Q8NGG4 311 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 TCTEX1D2Q8WW35 142 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 DCUN1D4Q92564 292 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 S1PR3Q99500 378 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 ARPC5LQ9BPX5 153 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 TMEM133Q9H2Q1 129 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 UBTD1Q9HAC8 227 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 LYRM2Q9NU23 88 aaPredicted RBP6.1□□□□□ -1.43
ERCC3-204ENST00000456257 CACNG5Q9UF02 275 aa6.1□□□□□ -1.43
ERCC3-204ENST00000456257 LOC105371242A0A075B767 164 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms