RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 IGKV1-16P04430 117 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 DUTP33316 252 aaKnown RBP11.65□□□□□ -0.54
CLCN1-203ENST00000455478 HRH1P35367 487 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 DGCR2P98153 550 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 C9orf152Q5JTZ5 239 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 SHISA2Q6UWI4 295 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 NPBQ8NG41 125 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
CLCN1-203ENST00000455478 FCAMRQ8WWV6 532 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 DDB2Q92466 427 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 WNT10AQ9GZT5 417 aa11.65□□□□□ -0.54
CLCN1-203ENST00000455478 RBMX2Q9Y388 322 aaKnown RBP11.65□□□□□ -0.54
CLCN1-203ENST00000455478 PLXNB1O43157 2135 aa11.65□□□□□ -0.55
CLCN1-203ENST00000455478 LINC01548A6NM66 108 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 LINC00473A8K010 186 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 GABARAPH6UMI1 98 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 CTDSPLO15194 276 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 VDAC2P45880 294 aaPredicted RBP11.64□□□□□ -0.55
CLCN1-203ENST00000455478 THBS3P49746 956 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 EIF4EBP1Q13541 118 aaPredicted RBP11.64□□□□□ -0.55
CLCN1-203ENST00000455478 IL18Q14116 193 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 MMDQ15546 238 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 KLHDC1Q8N7A1 406 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 RNF5Q99942 180 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 CITED1Q99966 193 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 CCL28Q9NRJ3 127 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 SLC35D1Q9NTN3 355 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 LIN7CQ9NUP9 197 aaKnown RBP11.64□□□□□ -0.55
CLCN1-203ENST00000455478 RABL2AQ9UBK7 228 aaPredicted RBP11.64□□□□□ -0.55
CLCN1-203ENST00000455478 RABL2BQ9UNT1 228 aa11.64□□□□□ -0.55
CLCN1-203ENST00000455478 NBR2O15453 112 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 NDUFA3O95167 84 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 IGHG2P01859 326 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 APOA2P02652 100 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 VSIG10L2P0DP72 767 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 FXYD4P59646 89 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 RPL30P62888 115 aaKnown RBP11.63□□□□□ -0.55
CLCN1-203ENST00000455478 MRPS10P82664 201 aaKnown RBP11.63□□□□□ -0.55
CLCN1-203ENST00000455478 TAGLNQ01995 201 aaKnown RBP11.63□□□□□ -0.55
CLCN1-203ENST00000455478 MSMO1Q15800 293 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 ARSJQ5FYB0 599 aaPredicted RBP11.63□□□□□ -0.55
CLCN1-203ENST00000455478 PDPNQ86YL7 162 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 BVESQ8NE79 360 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 SMIM4Q8WVI0 70 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 SECTM1Q8WVN6 248 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 ADTRPQ96IZ2 230 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 RASL11BQ9BPW5 248 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 ZNF2Q9BSG1 426 aaPredicted RBP11.63□□□□□ -0.55
CLCN1-203ENST00000455478 SLC5A7Q9GZV3 580 aa11.63□□□□□ -0.55
CLCN1-203ENST00000455478 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 M0QYG6 137 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 CD3DP04234 171 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 RPS16P62249 146 aaKnown RBP11.62□□□□□ -0.55
CLCN1-203ENST00000455478 C5orf64Q2M2E5 130 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 OR6F1Q8NGZ6 308 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 MOB3AQ96BX8 217 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 FLYWCH2Q96CP2 140 aaKnown RBP11.62□□□□□ -0.55
CLCN1-203ENST00000455478 GPHA2Q96T91 129 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 HSPB9Q9BQS6 159 aa11.62□□□□□ -0.55
CLCN1-203ENST00000455478 TINAGL1Q9GZM7 467 aaPredicted RBP11.62□□□□□ -0.55
CLCN1-203ENST00000455478 ZNF107Q9UII5 783 aaPredicted RBP11.62□□□□□ -0.55
CLCN1-203ENST00000455478 A6NHS1 94 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 RRHO14718 337 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 GSTZ1O43708 216 aaPredicted RBP11.61□□□□□ -0.55
CLCN1-203ENST00000455478 PEX14O75381 377 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 CD74P04233 296 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 GNRHRP30968 328 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 BRWD1-AS2P59051 145 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 HERV-K104P61576 105 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
CLCN1-203ENST00000455478 PSG5Q15238 335 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 TMEM177Q53S58 311 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 ACTBL2Q562R1 376 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 ZNF818PQ6ZRF7 136 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 SLC35E3Q7Z769 313 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 CCDC190Q86UF4 302 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 TMEM17Q86X19 198 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 MFSD4AQ8N468 514 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 TMEM229BQ8NBD8 167 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 ZBTB34Q8NCN2 500 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 HSD17B10Q99714 261 aaKnown RBP11.61□□□□□ -0.55
CLCN1-203ENST00000455478 TAS2R8Q9NYW2 309 aa11.61□□□□□ -0.55
CLCN1-203ENST00000455478 PKD1L1Q8TDX9 2849 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 SRRM4A7MD48 611 aaKnown RBP11.6□□□□□ -0.55
CLCN1-203ENST00000455478 FCN1O00602 326 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 IGLV2-23P01705 113 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 RRASP10301 218 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 TBPP20226 339 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 S100A5P33763 92 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 TSPAN5P62079 268 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 RTL8BQ17RB0 113 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 RNASE10Q5GAN6 216 aaKnown RBP11.6□□□□□ -0.55
CLCN1-203ENST00000455478 HIST2H2BDQ6DRA6 164 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 LIN54Q6MZP7 749 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 ZNF66Q6ZN08 573 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 CENPVQ7Z7K6 275 aaPredicted RBP11.6□□□□□ -0.55
CLCN1-203ENST00000455478 OR4D10Q8NGI6 311 aa11.6□□□□□ -0.55
CLCN1-203ENST00000455478 OR6Q1Q8NGQ2 317 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms