RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 IGHV4-38-2P0DP08 117 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 GPR12P47775 334 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 FCN2Q15485 313 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 C2orf68Q2NKX9 166 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 HLA-DRB5Q30154 266 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 TMEM30BQ3MIR4 351 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 FBLN7Q53RD9 439 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 NCR3LG1Q68D85 454 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 OR11H6Q8NGC7 330 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 OR11H7Q8NGC8 314 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 ZFAND1Q8TCF1 268 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF431Q8TF32 576 aaPredicted RBP8.9□□□□□ -0.99
SCN9A-205ENST00000454569 RTN4IP1Q8WWV3 396 aaPredicted RBP8.9□□□□□ -0.99
SCN9A-205ENST00000454569 EDARADDQ8WWZ3 215 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 ST6GAL2Q96JF0 529 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 TP53RKQ96S44 253 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 RANGRFQ9HD47 186 aaPredicted RBP8.9□□□□□ -0.99
SCN9A-205ENST00000454569 RAB9BQ9NP90 201 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 AUP1Q9Y679 476 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 TNCP24821 2201 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 TRAV20A0A0B4J274 112 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 CRYM-AS1A6NIL9 109 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 BUB1B-PAK6H3BSN5 160 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 M0R1X1 148 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 MPPED1O15442 326 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 SULT1A3P0DMM9 295 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 SULT1A4P0DMN0 295 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 DHRS2Q13268 280 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 SLC9A3R2Q15599 337 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 OR2B11Q5JQS5 317 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 LIN54Q6MZP7 749 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 BRD3OSQ6XYD6 125 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 C8orf86Q6ZUL3 223 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 LYG2Q86SG7 212 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 C8orf31Q8N9H6 132 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 OR51H1Q8NH63 302 aa8.89□□□□□ -0.99
SCN9A-205ENST00000454569 TRAV40A0A0B4J280 105 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 hCG_1809904A0A1W2PP81 198 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 A0A1W2PPE2 198 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 A0A1W2PR64 198 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 A0A1W2PRV1 198 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 C9orf170A2RU37 121 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 TOR1AO14656 332 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 RAB29O14966 203 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 ANXA3P12429 323 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 DUTP33316 252 aaKnown RBP8.88□□□□□ -0.99
SCN9A-205ENST00000454569 EIF2B2P49770 351 aaKnown RBP8.88□□□□□ -0.99
SCN9A-205ENST00000454569 GZMKP49863 264 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 RND3P61587 244 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 ANKRD55Q3KP44 614 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 ABCA11PQ4W5N1 156 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 TMEM128Q5BJH2 165 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 CYB5R2Q6BCY4 276 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 LPCAT3Q6P1A2 487 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF833PQ6ZTB9 187 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF383Q8NA42 475 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 BEND2Q8NDZ0 799 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 OR13D1Q8NGV5 346 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 OR10X1Q8NGY0 326 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 LHFPL5Q8TAF8 219 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 CASTOR1Q8WTX7 329 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 FYTTD1Q96QD9 318 aaKnown RBP8.88□□□□□ -0.99
SCN9A-205ENST00000454569 MRPL20Q9BYC9 149 aaKnown RBP8.88□□□□□ -0.99
SCN9A-205ENST00000454569 HEXA-AS1Q9H8Q6 139 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 MGAT4CQ9UBM8 478 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 GAB2Q9UQC2 676 aa8.88□□□□□ -0.99
SCN9A-205ENST00000454569 RAMP3O60896 148 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 SFT2D2O95562 160 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 IGKV1-39P01597 117 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 IGKV1D-39P04432 117 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 OR5AC1P0C628 307 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 CXCL3P19876 107 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 RAB7AP51149 207 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 UBE2E1P51965 193 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF137PP52743 207 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 PRRX1P54821 245 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 TMEM187Q14656 261 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 ZFP69Q49AA0 526 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF585BQ52M93 769 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 C11orf88Q6PI97 169 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 TCTE3Q8IZS6 198 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 C12orf45Q8N5I9 185 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-205ENST00000454569 UXS1Q8NBZ7 420 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 GLYATL2Q8WU03 294 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 DDB2Q92466 427 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 WDR89Q96FK6 387 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF486Q96H40 463 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-205ENST00000454569 AKR1E2Q96JD6 320 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 NAA60Q9H7X0 242 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 HILPDAQ9Y5L2 63 aa8.87□□□□□ -0.99
SCN9A-205ENST00000454569 IGHV3-72A0A0B4J1Y9 119 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 TEX13DA0A0J9YY54 714 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-205ENST00000454569 C3orf85A0A1B0GTC6 90 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 F2RP25116 425 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 IL17RELQ6ZVW7 336 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 RITA1Q96K30 269 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms