RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 CX3CL1P78423 397 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 PITPNAQ00169 270 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 PSG5Q15238 335 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 TIMM50Q3ZCQ8 353 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 IDNKQ5T6J7 187 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 ZNF660Q6AZW8 331 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-207ENST00000453796 MINDY2Q8NBR6 621 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 PARP11Q9NR21 331 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 SLC35D1Q9NTN3 355 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 SPATA2Q9UM82 520 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 WSB1Q9Y6I7 421 aa11.37□□□□□ -0.59
HSPG2-207ENST00000453796 TRAV41A0A0B4J266 112 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 SPDEFO95238 335 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 DUS4LO95620 317 aaKnown RBP11.36□□□□□ -0.59
HSPG2-207ENST00000453796 IGLV2-23P01705 113 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 APOA2P02652 100 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 REC114Q7Z4M0 266 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 DDB2Q92466 427 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 DUX3Q96PT4 197 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 GINS4Q9BRT9 223 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 ST6GALNAC5Q9BVH7 336 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 KLK15Q9H2R5 256 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 NECAP2Q9NVZ3 263 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 AURKAIP1Q9NWT8 199 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-207ENST00000453796 METTL1Q9UBP6 276 aaKnown RBP11.36□□□□□ -0.59
HSPG2-207ENST00000453796 NUBP2Q9Y5Y2 271 aa11.36□□□□□ -0.59
HSPG2-207ENST00000453796 TNCP24821 2201 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 A0A0A6YYH2 397 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 A6NJ64 397 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 CCL24O00175 119 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 AIREO43918 545 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 SOX15O60248 233 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
HSPG2-207ENST00000453796 GNG2P59768 71 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 RPS16P62249 146 aaKnown RBP11.35□□□□□ -0.59
HSPG2-207ENST00000453796 SSBP2P81877 361 aaPredicted RBP11.35□□□□□ -0.59
HSPG2-207ENST00000453796 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 CNIH2Q6PI25 160 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 ZNF562Q6V9R5 426 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 C4orf3Q8WVX3 66 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
HSPG2-207ENST00000453796 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
HSPG2-207ENST00000453796 VCX3AQ9NNX9 186 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 TPSG1Q9NRR2 321 aa11.35□□□□□ -0.59
HSPG2-207ENST00000453796 TRAV18A0A075B6X5 111 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 LINC00473A8K010 186 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 I3L521 148 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 HLA-DQB1P01920 261 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 CRYGBP07316 175 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 CTXN2P0C2S0 81 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 DUTP33316 252 aaKnown RBP11.34□□□□□ -0.59
HSPG2-207ENST00000453796 TAGLNQ01995 201 aaKnown RBP11.34□□□□□ -0.59
HSPG2-207ENST00000453796 EGFEM1PQ0D2K5 195 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 FHL3Q13643 280 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 PLGLAQ15195 96 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 TMEM177Q53S58 311 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 UBE2E2Q96LR5 201 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 ANXA10Q9UJ72 324 aa11.34□□□□□ -0.59
HSPG2-207ENST00000453796 RBM7Q9Y580 266 aaKnown RBP11.34□□□□□ -0.59
HSPG2-207ENST00000453796 IGKV1D-13A0A0B4J2D9 117 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.6
HSPG2-207ENST00000453796 ARPC1BO15143 372 aaKnown RBP11.33□□□□□ -0.6
HSPG2-207ENST00000453796 SLC25A17O43808 307 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 TUSC2O75896 110 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 CA2P00918 260 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 IGLV2-14P01704 120 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 IGKV1-13P0DP09 117 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 NFYAP23511 347 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-207ENST00000453796 LGALS7P47929 136 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 RAB9AP51151 201 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 LSM3P62310 102 aaKnown RBP11.33□□□□□ -0.6
HSPG2-207ENST00000453796 RUNX1Q01196 453 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 ECSCRQ19T08 205 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 MRGPRG-AS1Q2M3A8 158 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 AKIRIN2Q53H80 203 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 CROCCP3Q8IVE0 287 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 ZNF645Q8N7E2 425 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 GVQW1Q8N7I0 195 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 TCTEX1D1Q8N7M0 179 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 BVESQ8NE79 360 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
HSPG2-207ENST00000453796 AUNIPQ9H7T9 357 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 GNB4Q9HAV0 340 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 OR2W1Q9Y3N9 320 aa11.33□□□□□ -0.6
HSPG2-207ENST00000453796 A0A1W2PN81 502 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 RRASP10301 218 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 PTHLHP12272 177 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 CHRNA7P36544 502 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 LUMP51884 338 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-207ENST00000453796 KRTAP10-11P60412 298 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 ASPHD1Q5U4P2 390 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 HOGA1Q86XE5 327 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 ADTRPQ96IZ2 230 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 FUNDC2Q9BWH2 189 aa11.32□□□□□ -0.6
HSPG2-207ENST00000453796 DIABLOQ9NR28 239 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms