RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 CT45A6P0DMU7 189 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CT45A5P0DMU8 189 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CT45A7P0DMV0 189 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RRASP10301 218 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 HLA-GP17693 338 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RPL30P62888 115 aaKnown RBP10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 PRB3Q04118 309 aaPredicted RBP10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 KLRD1Q13241 179 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ANKRD55Q3KP44 614 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MIDNQ504T8 468 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LIN54Q6MZP7 749 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 C1orf229Q6ZS94 237 aaPredicted RBP10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TGIF2LXQ8IUE1 241 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNF695Q8IW36 515 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DRAXINQ8NBI3 349 aaPredicted RBP10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 OR4P4Q8NGL7 312 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 IL22RA2Q969J5 263 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RPEQ96AT9 228 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 C5orf30Q96GV9 206 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TMEM56Q96MV1 263 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNRD1Q9P1U0 126 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TBL2Q9Y4P3 447 aaKnown RBP10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TMEM56-RWDD3S4R434 201 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LINC00473A8K010 186 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LY6LH3BQJ8 138 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RBFOX2O43251 390 aaKnown RBP eCLIP10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 IFNA21P01568 189 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MC5RP33032 325 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNF816Q0VGE8 651 aaPredicted RBP10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 GPR157Q5UAW9 335 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 SPAG16Q8N0X2 631 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MALSU1Q96EH3 234 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 AIFM2Q9BRQ8 373 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RAB18Q9NP72 206 aa10.17□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DUXBA0A1W2PPF3 345 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DBX1A6NMT0 343 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 APOA2P02652 100 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 SULT1A3P0DMM9 295 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 SULT1A4P0DMN0 295 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LPAR6P43657 344 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 BPIFB3P59826 476 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 FCN2Q15485 313 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RTL8BQ17RB0 113 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNF585BQ52M93 769 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TPTE2P1Q5T6R2 138 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TMEM268Q5VZI3 342 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DHRS7BQ6IAN0 325 aaPredicted RBP10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CCDC144NLQ6NUI1 221 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 PDZD9Q8IXQ8 264 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 SELENOHQ8IZQ5 122 aaKnown RBP10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 OR8H3Q8N146 312 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNF383Q8NA42 475 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 OR5AN1Q8NGI8 311 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DDB2Q92466 427 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RBPMSQ93062 196 aaKnown RBP10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 NABP2Q9BQ15 211 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 PLEKHA2Q9HB19 425 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 SLC35D1Q9NTN3 355 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MGAT4CQ9UBM8 478 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TMED3Q9Y3Q3 217 aa10.16□□□□□ -0.78
HLA-DPA1-244ENST00000453337 IGHV1-69DA0A0B4J2H0 117 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 IGHV1-3A0A0C4DH29 117 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 A0A1W2PRD5 423 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 A0A1W2PRF3 423 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 A0A1W2PRM7 423 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 NPFFO15130 113 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 PFDN1O60925 122 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 FCGR3BO75015 233 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 HPRT1P00492 218 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 IGHV1-69P01742 117 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 HOXB5P09067 269 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 REG1BP48304 166 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RAB13P51153 203 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ARHGDIBP52566 201 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LINC00205P59089 165 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 GSG1LQ6UXU4 331 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MOB3BQ86TA1 216 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TEX29Q8N6K0 151 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 C18orf12Q96KH6 178 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 PRR13Q9NZ81 148 aa10.15□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CREBBPQ92793 2442 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 C5orf51A6NDU8 294 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 H7C2Y5 167 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 GOSR2O14653 212 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SMAD7O15105 426 aaKnown RBP10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CCNKO75909 580 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 HRASP01112 189 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 VDAC1P21796 283 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 BRWD1-AS2P59051 145 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CYCSP99999 105 aaKnown RBP10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SSX2Q16385 188 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OR2B11Q5JQS5 317 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 AKAP14Q86UN6 197 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 PDPNQ86YL7 162 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CIARTQ8N365 385 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms