RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 OR8U9P0C7N5 309 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 GNB3P16520 340 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 GALP22466 123 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 TALDO1P37837 337 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 ECI1P42126 302 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 CRIP2P52943 208 aaPredicted RBP10.01□□□□□ -0.81
CHD3-206ENST00000452447 LINC00205P59089 165 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 GNB1P62873 340 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 ARFRP1Q13795 201 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 PSG5Q15238 335 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 IGSF11Q5DX21 431 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 C22orf42Q6IC83 251 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 PYHIN1Q6K0P9 492 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 UNQ5815/PRO19632Q6UWF5 114 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 ZNF562Q6V9R5 426 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 PPP1R27Q86WC6 154 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 ZNF383Q8NA42 475 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.01□□□□□ -0.81
CHD3-206ENST00000452447 B9D2Q9BPU9 175 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 FAM103A1Q9BTL3 118 aaKnown RBP10.01□□□□□ -0.81
CHD3-206ENST00000452447 CENPOQ9BU64 300 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 OR2D2Q9H210 308 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 RBM7Q9Y580 266 aaKnown RBP10.01□□□□□ -0.81
CHD3-206ENST00000452447 RAB27BO00194 218 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 MFNGO00587 321 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 SOX15O60248 233 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 SPDEFO95238 335 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 CA2P00918 260 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 GSTT2P0CG29 244 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 GSTT2BP0CG30 244 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 HIST1H1DP16402 221 aaKnown RBP10.01□□□□□ -0.81
CHD3-206ENST00000452447 INSL3P51460 131 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 AKIRIN2Q53H80 203 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 C19orf54Q5BKX5 351 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 SPARTQ8N0X7 666 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 LFNGQ8NES3 379 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 CASTOR1Q8WTX7 329 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 GINS4Q9BRT9 223 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 TOLLIPQ9H0E2 274 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 SLC35D1Q9NTN3 355 aa10.01□□□□□ -0.81
CHD3-206ENST00000452447 ZNF230Q9UIE0 474 aaPredicted RBP10.01□□□□□ -0.81
CHD3-206ENST00000452447 TRBV6-7A0A0A0MS04 114 aa10□□□□□ -0.81
CHD3-206ENST00000452447 A0A0B4J203 849 aa10□□□□□ -0.81
CHD3-206ENST00000452447 SLC25A17O43808 307 aa10□□□□□ -0.81
CHD3-206ENST00000452447 DIRAS3O95661 229 aa10□□□□□ -0.81
CHD3-206ENST00000452447 EGR2P11161 476 aaPredicted RBP10□□□□□ -0.81
CHD3-206ENST00000452447 PSMB9P28065 219 aa10□□□□□ -0.81
CHD3-206ENST00000452447 CBX3Q13185 183 aa10□□□□□ -0.81
CHD3-206ENST00000452447 ARL6IP1Q15041 203 aa10□□□□□ -0.81
CHD3-206ENST00000452447 C11orf87Q6NUJ2 197 aa10□□□□□ -0.81
CHD3-206ENST00000452447 MAFIPQ8WZ33 124 aa10□□□□□ -0.81
CHD3-206ENST00000452447 ARPC1AQ92747 370 aa10□□□□□ -0.81
CHD3-206ENST00000452447 PRR25Q96S07 402 aa10□□□□□ -0.81
CHD3-206ENST00000452447 CABLES2Q9BTV7 478 aa10□□□□□ -0.81
CHD3-206ENST00000452447 ALX4Q9H161 411 aaPredicted RBP10□□□□□ -0.81
CHD3-206ENST00000452447 ATG5Q9H1Y0 275 aa10□□□□□ -0.81
CHD3-206ENST00000452447 GAB2Q9UQC2 676 aa10□□□□□ -0.81
CHD3-206ENST00000452447 TENM3Q9P273 2699 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 LINC01619G3V211 115 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 OVOL1O14753 267 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 CNIH1O95406 144 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 LGALS7P47929 136 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 FXYD3Q14802 87 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 ASPHD1Q5U4P2 390 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 UBE2UQ5VVX9 321 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 GRPEL2Q8TAA5 225 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 DCUN1D4Q92564 292 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 MS4A10Q96PG2 267 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 SLA2Q9H6Q3 261 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 SDHAF2Q9NX18 166 aa9.99□□□□□ -0.81
CHD3-206ENST00000452447 ZNF256Q9Y2P7 627 aaPredicted RBP9.99□□□□□ -0.81
CHD3-206ENST00000452447 SMIM30A4D0T7 59 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 TRIM64CA6NLI5 447 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 LY86O95711 162 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 LGALS1P09382 135 aaKnown RBP9.98□□□□□ -0.81
CHD3-206ENST00000452447 FGF9P31371 208 aaPredicted RBP9.98□□□□□ -0.81
CHD3-206ENST00000452447 RPL5P46777 297 aaKnown RBP9.98□□□□□ -0.81
CHD3-206ENST00000452447 TPPP2P59282 170 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 TAGLNQ01995 201 aaKnown RBP9.98□□□□□ -0.81
CHD3-206ENST00000452447 NEDD8Q15843 81 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 SRSF7Q16629 238 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHD3-206ENST00000452447 RTL8BQ17RB0 113 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 ZNF429Q86V71 674 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 HARBI1Q96MB7 349 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 TPSG1Q9NRR2 321 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 ZNF355PQ9NSJ1 428 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 TXNL4BQ9NX01 149 aaKnown RBP9.98□□□□□ -0.81
CHD3-206ENST00000452447 SSR3Q9UNL2 185 aa9.98□□□□□ -0.81
CHD3-206ENST00000452447 NOTOA8MTQ0 251 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 SHOXO15266 292 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 NOL3O60936 208 aaKnown RBP9.97□□□□□ -0.81
CHD3-206ENST00000452447 SAP30O75446 220 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 IGHV3-11P01762 117 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 TRGV3P03979 118 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
CHD3-206ENST00000452447 SLURP1P55000 103 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 TIMM50Q3ZCQ8 353 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 GPR141Q7Z602 305 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 NR2C2APQ86WQ0 139 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 DLX4Q92988 240 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms